Evidence map›Paper›PMID 38409116›Full record

ArticleCell discovery2024

Single-cell multi-omics analysis of lineage development and spatial organization in the human fetal cerebellum.

Fuqiang Yang, Ziqi Zhao, Dan Zhang, Yu Xiong, Xinran Dong, Yuchen Wang, Min Yang, Taotao Pan, Chuanyu Liu, Kaiyi Liu and 8 more

Open access · goldAbstract read
In one paragraph

Article in Cell discovery, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 8 institutions in 2 countries.

Fuqiang Yang *State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Beijing, China.
Ziqi Zhao *State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Beijing, China.
Dan Zhang *State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Beijing, China.ORCID http://orcid.org/0000-0001-7970-8332
Yu Xiong *Shanghai Key Laboratory of Female Reproductive Endocrine-Related Diseases, Obstetrics and Gynecology Hospital of Fudan University, Shanghai, China.
Xinran Dong *Center for Molecular Medicine, Children's Hospital of Fudan University, Shanghai, China.
Yuchen WangState Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Beijing, China.
Min YangDepartment of Neonatology, Obstetrics and Gynecology Hospital of Fudan University, Shanghai, China.
Taotao PanBGI-Beijing, Beijing, China.
Chuanyu LiuBGI-Beijing, Beijing, China.ORCID http://orcid.org/0000-0003-2258-0897
Kaiyi LiuKey Laboratory of Birth Defects, Children's Hospital of Fudan University, Shanghai, China.
Yifeng LinKey Laboratory of Birth Defects, Children's Hospital of Fudan University, Shanghai, China.
Yongjie LiuState Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Beijing, China.
Qiang TuState Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Beijing, China.
Yashan DangState Key Laboratory of Membrane Biology, Tsinghua-Peking Center for Life Sciences, IDG/McGovern Institute for Brain Research, School of Life Sciences, Tsinghua University, Beijing, China.
Mingyang XiaKey Laboratory of Birth Defects, Children's Hospital of Fudan University, Shanghai, China. myoung1314@foxmail.com.
Da MiState Key Laboratory of Membrane Biology, Tsinghua-Peking Center for Life Sciences, IDG/McGovern Institute for Brain Research, School of Life Sciences, Tsinghua University, Beijing, China. mida@mail.tsinghua.edu.cn.ORCID http://orcid.org/0000-0002-7829-1923
Wenhao ZhouGuangzhou Women and Children's Medical Center, Guangzhou Medical University, Guangzhou, Guangdong, China. zhouwenhao@fudan.edu.cn.ORCID http://orcid.org/0000-0001-8956-7238
Zhiheng XuState Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Beijing, China. zhxu@genetics.ac.cn.ORCID http://orcid.org/0000-0002-4809-2851
Institute of Genetics and Developmental Biology · CNChildren's Hospital of Fudan University · CNObstetrics and Gynecology Hospital of Fudan University · CNBeijing Graphene Institute · CNBGI Group (China) · CNCenter for Life Sciences · CNGuangzhou Women and Children Medical Center · CNKing Center · US

Funding

Chinese Academy of Sciences (CAS) YJKYYQ20200052Ministry of Science and Technology of the People's Republic of China (Chinese Ministry of Science and Technology) STI2030-Major Projects 2021ZD0202300National Natural Science Foundation of China (National Science Foundation of China) 31921002National Natural Science Foundation of China (National Science Foundation of China) 32061143026National Natural Science Foundation of China (National Science Foundation of China) 32271024National Natural Science Foundation of China (National Science Foundation of China) 32330038National Natural Science Foundation of China (National Science Foundation of China) 32394030
6 · The paper itself

Abstract

Human cerebellum encompasses numerous neurons, exhibiting a distinct developmental paradigm from cerebrum. Here we conducted scRNA-seq, scATAC-seq and spatial transcriptomic analyses of fetal samples from gestational week (GW) 13 to 18 to explore the emergence of cellular diversity and developmental programs in the developing human cerebellum. We identified transitory granule cell progenitors that are conserved across species. Special patterns in both granule cells and Purkinje cells were dissected multidimensionally. Species-specific gene expression patterns of cerebellar lobes were characterized and we found that PARM1 exhibited inconsistent distribution in human and mouse granule cells. A novel cluster of potential neuroepithelium at the rhombic lip was identified. We also resolved various subtypes of Purkinje cells and unipolar brush cells and revealed gene regulatory networks controlling their diversification. Therefore, our study offers a valuable multi-omics landscape of human fetal cerebellum and advances our understanding of development and spatial organization of human cerebellum.

Identifiers

PMID38409116
PMCPMC10897198
OpenAlexW4392168224

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.