Evidence map›Paper›PMID 38405785›Full record

ArticlebioRxiv : the preprint server for biology2024

Loop extrusion-mediated plasmid DNA cleavage by the bacterial SMC Wadjet complex.

Biswajit Pradhan, Amar Deep, Jessica König, Martin Dieter Baaske, Kevin D Corbett, Eugene Kim

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 9 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Biswajit PradhanMax Planck Institute of Biophysics, 60438 Frankfurt am Main, Germany.ORCID 0000-0002-6101-8728
Amar DeepDepartment of Cellular and Molecular Medicine, University of California San Diego, La Jolla CA, USA.
Jessica KönigMax Planck Institute of Biophysics, 60438 Frankfurt am Main, Germany.
Martin Dieter BaaskeMax Planck Institute of Biophysics, 60438 Frankfurt am Main, Germany.
Kevin D CorbettDepartment of Cellular and Molecular Medicine, University of California San Diego, La Jolla CA, USA.
Eugene KimMax Planck Institute of Biophysics, 60438 Frankfurt am Main, Germany.ORCID 0000-0002-1759-6360
Max Planck Institute of Biophysics · DEUniversity of California San Diego · US

Funding

Molecular mechanisms of nucleic acid recognition and maintenance in meiosis and innate immunityR35GM144121 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Kevin Daniel Corbett · 2022 to 2026
$2.7M
NIGMS NIH HHS R35 GM144121
6 · The paper itself

Abstract

Structural maintenance of chromosomes (SMC) protein complexes play pivotal roles in genome organization and maintenance across all domains of life. In prokaryotes, SMC family Wadjet complexes structurally resemble the widespread MukBEF genome-organizing complexes but serve a defensive role by inhibiting plasmid transformation. We previously showed that Wadjet specifically cleaves circular DNA; however, the molecular mechanism underlying DNA substrate recognition remains unclear. Here, we use

Identifiers

PMID38405785
PMCPMC10889018
OpenAlexW4391922122

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.