Evidence map›Paper›PMID 38405202›Full record

ArticleNeuro-oncology advances

Unsupervised machine learning models reveal predictive clinical markers of glioblastoma patient survival using white blood cell counts prior to initiating chemoradiation.

Wesley Wang, Zeynep Temerit Kumm, Cindy Ho, Ideli Zanesco-Fontes, Gustavo Texiera, Rui Manuel Reis, Horacio Martinetto, Javaria Khan, Martin G McCandless, Katherine E Baker and 6 more

Abstract read
In one paragraph

Article in Neuro-oncology advances. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors.

Wesley WangDepartment of Pathology, Ohio State University Wexner Medical Center, Columbus, Ohio, USA.ORCID https://orcid.org/0000-0001-7904-9015
Zeynep Temerit KummDepartment of Pathology, Ohio State University Wexner Medical Center, Columbus, Ohio, USA.
Cindy HoDepartment of Pathology, Ohio State University Wexner Medical Center, Columbus, Ohio, USA.
Ideli Zanesco-FontesMolecular Oncology Research Center, Barretos Cancer Hospital, Barretos, Brazil.
Gustavo TexieraDepartment of Pathology, Barretos Cancer Hospital, Barretos, Brazil.
Rui Manuel ReisMolecular Oncology Research Center, Barretos Cancer Hospital, Barretos, Brazil.ORCID https://orcid.org/0000-0002-9639-7940
Horacio MartinettoDepartamento de Neuropatología y Biología Molecular, Instituto de Investigaciones Neurológicas Dr Raúl Carrea (FLENI), Buenos Aires, Argentina.
Javaria KhanDepartment of Pathology, University of Mississippi Medical Center, Jackson, Mississippi, USA.
Martin G McCandlessDepartment of Neuro-Oncology, University of Mississippi Medical Center, Jackson, Mississippi, USA.
Katherine E BakerDepartment of Neuro-Oncology, University of Mississippi Medical Center, Jackson, Mississippi, USA.
Mark D AndersonDepartment of Neuro-Oncology, University of Mississippi Medical Center, Jackson, Mississippi, USA.
Muhammad Omar ChohanDepartment of Neurosurgery, University of Mississippi Medical Center, Jackson, Mississippi, USA.
Sasha BeyerDepartment of Radiation Oncology, Ohio State University Wexner Medical Center, Columbus, Ohio, USA.
J Brad ElderDepartment of Neurosurgery, Ohio State University Wexner Medical Center, Columbus, Ohio, USA.
Pierre GiglioDepartment of Neurology, Ohio State University Wexner Medical Center, Columbus, Ohio, USA.ORCID https://orcid.org/0000-0001-5165-0984
José Javier OteroDepartment of Pathology, Ohio State University Wexner Medical Center, Columbus, Ohio, USA.ORCID https://orcid.org/0000-0003-0680-4520

Funding

The OSU Center for Clinical and Translational Science: Advancing Today's Discoveries to Improve HealthUL1TR002733 · NCATS · OHIO STATE UNIVERSITY · PI RINGEL, MATTHEW D · 2018 to 2022
$28.9M
Mechanisms of repeated opioid use dependent remodeling in respiratory controlR01HL163965 · NHLBI · UNIVERSITY OF CHICAGO · PI GARCIA, ALFREDO J, OTERO, JOSE JAVIER · 2022 to 2025
$3.0M
NRSA Training CoreTL1TR002735 · NCATS · OHIO STATE UNIVERSITY · PI BUMGARDNER, GINNY L, KIRSCHNER, LAWRENCE S · 2018 to 2022
$1.3M
Implementation of Machine Learning Workflows in Primary Brain Tumor DiagnosticsR03NS116334 · NINDS · OHIO STATE UNIVERSITY · PI OTERO, JOSE JAVIER, THOMAS, DIANA LYNN · 2020 to 2021
$171k
NCATS NIH HHS TL1 TR002735NCATS NIH HHS UL1 TR002733NHLBI NIH HHS R01 HL163965NINDS NIH HHS R03 NS116334
6 · The paper itself

Abstract

Background: Glioblastoma is a malignant brain tumor requiring careful clinical monitoring even after primary management. Personalized medicine has suggested the use of various molecular biomarkers as predictors of patient prognosis or factors utilized for clinical decision-making. However, the accessibility of such molecular testing poses a constraint for various institutes requiring identification of low-cost predictive biomarkers to ensure equitable care. Methods: We collected retrospective data from patients seen at Ohio State University, University of Mississippi, Barretos Cancer Hospital (Brazil), and FLENI (Argentina) who were managed for glioblastoma-amounting to 581 patient records documented using REDCap. Patients were evaluated using an unsupervised machine learning approach comprised of dimensionality reduction and eigenvector analysis to visualize the inter-relationship of collected clinical features. Results: We discovered that the serum white blood cell (WBC) count of a patient during baseline planning for treatment was predictive of overall survival with an over 6-month median survival difference between the upper and lower quartiles of WBC count. By utilizing an objective PD-L1 immunohistochemistry quantification algorithm, we were further able to identify an increase in PD-L1 expression in glioblastoma patients with high serum WBC counts. Conclusions: These findings suggest that in a subset of glioblastoma patients the incorporation of WBC count and PD-L1 expression in the brain tumor biopsy as simple biomarkers predicting glioblastoma patient survival. Moreover, machine learning models allow the distillation of complex clinical data sets to uncover novel and meaningful clinical relationships.

Indexed as

clinical decision-makingglioblastomamachine learningsurvival outcomes

Identifiers

PMID38405202
PMCPMC10894654

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.