Evidence map›Paper›PMID 38402263›Full record

ArticleScientific reports2024

Bioinformatics analysis for the identification of Sprouty-related EVH1 domain-containing protein 3 expression and its clinical significance in thyroid carcinoma.

Xiaowei Zhang, Xiangwei Meng, Pengyun Wang, Chong Luan, Haiming Wang

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Xiaowei ZhangDepartment of Orthopedics, Zibo Central Hospital, No 54, Gong Qing Tuan Xi Road, Zibo, 255036, People's Republic of China.
Xiangwei MengDepartment of Drug Clinical Trials, Zibo Central Hospital, Zibo, People's Republic of China.
Pengyun WangDepartment of Orthopedics, Zibo Central Hospital, No 54, Gong Qing Tuan Xi Road, Zibo, 255036, People's Republic of China.
Chong LuanDepartment of Orthopedics, Zibo Central Hospital, No 54, Gong Qing Tuan Xi Road, Zibo, 255036, People's Republic of China. gjwkyjs@163.com.
Haiming WangDepartment of thyroid and breast surgery, Zibo Municipal Hospital, Zibo, 255400, People's Republic of China. 17685666985@163.com.
Central Hospital of Zibo · CNThe Fourth People's Hospital of Zibo City · CN

Funding

Natural Science Foundation of Shandong Province ZR2020QH281Natural Science Foundation of Shandong Province ZR2021QH032TCM science and technology project of Shandong Province Q-2022012The research and development plan of Zibo 2020ZC010005
6 · The paper itself

Abstract

The poorly differentiated thyroid carcinoma (THCA) subtype is associated with an aggressive disease course, a less favorable overall prognosis, and an increased risk of distant organ metastasis. In this study, our objective was to explore the potential utility of the Sprouty-related EVH1 domain-containing protein 3 (SPRED3) as a biomarker for early diagnosis and prognosis in THCA patients. The differentially expressed prognostic-related genes associated with THCA were identified by querying The Cancer Genome Atlas (TCGA) database. The difference in the expression of the SPRED3 gene between thyroid carcinoma (THCA) tissues and normal tissues was analyzed using data from The Cancer Genome Atlas (TCGA) and further validated through immunohistochemistry. Univariate and multivariate Cox regression models were used, along with clinical information from THCA patients, to analyze the prognostic value of the SPRED3 gene in THCA patients. Functional enrichment analysis was subsequently performed to elucidate the molecular mechanisms underlying the regulatory effects of the SPRED3 gene on thyroid carcinoma. Additionally, we calculated the percentage of infiltrating immune cells in THCA patients and evaluated their correlation with SPRED3 gene expression. Compared with those in noncancerous thyroid tissue, the gene and protein expression levels of SPRED3 were found to be elevated in thyroid carcinoma tissues. Furthermore, the expression of SPRED3 in thyroid carcinoma exhibited significant correlations with tumor location, histological grade, pathological stage, and tumor node metastasis classification (TNM) stage. Univariate and multivariate Cox proportional hazards (Cox) regression analyses demonstrated that SPRED3 could serve as an independent prognostic factor for predicting the overall survival of THCA patients. The results of functional enrichment analysis suggested the potential involvement of SPRED3 in the regulation of extracellular matrix organization, epidermal development, signaling receptor activator activity, skin development, receptor ligand activity, glycosaminoglycan binding, neuroactive ligand‒receptor interaction, the IL-17 signaling pathway, and the PI3K-Akt signaling pathway. Additionally, there were significant correlations between the expression level of the SPRED3 gene and the infiltration of various immune cells (eosinophils, central memory T cells, neutrophils, macrophages, and NK cells) within the thyroid tumor microenvironment. SPRED3 can be used as a prognostic biomarker in patients with THCA could potentially be therapeutic target for THCA.

Indexed as

Clinical RelevanceThyroid NeoplasmsBiomarkersHumansLigandsPhosphatidylinositol 3-KinasesPrognosisRepressor ProteinsTumor MicroenvironmentBiomarkersLigandsPhosphatidylinositol 3-KinasesRepressor ProteinsSPRED3 protein, human

Identifiers

PMID38402263
PMCPMC10894204
OpenAlexW4392131096

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.