Evidence map›Paper›PMID 38400020›Full record

ArticleViruses2024

Molecular Epidemiology of Peste Des Petits Ruminants Virus in West Africa: Is Lineage IV Replacing Lineage II in Burkina Faso?

Abel S Biguezoton, Guy Sidwatta Ilboudo, Barbara Wieland, Rahinata W-Y Sawadogo, Fairou F Dah, Cheick A K Sidibe, Adrien Zoungrana, Edward Okoth, Michel Dione

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 4 countries.

Abel S BiguezotonCentre International de Recherche-Développement sur l'Elevage en Zone Subhumide (CIRDES), Unité de Recherche Maladies à Vecteurs et Biodiversité (UMaVeB), Bobo-Dioulasso 01 BP 454, Burkina Faso.
Guy Sidwatta IlboudoAnimal and Human Health Program, International Livestock Research Institute (ILRI), Ouagadougou 01 BP 1496, Burkina Faso.ORCID 0000-0001-6061-7035
Barbara WielandInstitute of Virology and Immunology (IVI), 3147 Mittelhausern, Switzerland.
Rahinata W-Y SawadogoCentre International de Recherche-Développement sur l'Elevage en Zone Subhumide (CIRDES), Unité de Recherche Maladies à Vecteurs et Biodiversité (UMaVeB), Bobo-Dioulasso 01 BP 454, Burkina Faso.
Fairou F DahCentre International de Recherche-Développement sur l'Elevage en Zone Subhumide (CIRDES), Unité de Recherche Maladies à Vecteurs et Biodiversité (UMaVeB), Bobo-Dioulasso 01 BP 454, Burkina Faso.
Cheick A K SidibeService Diagnostic et Recherche, Laboratoire Central Vétérinaire (LCV), Bamako BP 2295, Mali.
Adrien ZoungranaCentre International de Recherche-Développement sur l'Elevage en Zone Subhumide (CIRDES), Unité de Recherche Maladies à Vecteurs et Biodiversité (UMaVeB), Bobo-Dioulasso 01 BP 454, Burkina Faso.
Edward OkothAnimal and Human Health Program, International Livestock Research Institute (ILRI), P.O. Box 30709, Nairobi 00100, Kenya.ORCID 0000-0003-0689-823X
Michel DioneAnimal and Human Health Program, International Livestock Research Institute (ILRI), Dakar BP 24265, Senegal.ORCID 0000-0001-7812-5776
Centre international de recherche-développement sur l'elevage en zone subhumide · BFInternational Livestock Research Institute · KEMali-Folkecenter · MLUniversity of Bern · CH

Funding

EC-IFAD 2000002577
6 · The paper itself

Abstract

This study aimed at investigating the genetic lineages of peste des petits ruminants virus (PPRV) currently circulating in Burkina Faso. As part of PPR surveillance in 2021 and 2022, suspected outbreaks in different regions were investigated. A risk map was produced to determine high-risk areas for PPR transmission. Based on alerts, samples were obtained from three regions and all sampled localities were confirmed to fall within PPR high risk areas. We collected swab samples from the eyes, mouth, and nose of sick goats. Some tissue samples were also collected from dead animals suspected to be infected by PPRV. In total, samples from 28 goats were analysed. Virus confirmation was performed with RT-PCR amplification targeting the nucleocapsid (N) gene. Partial N gene sequencing (350 bp) was carried out using the RT-PCR products of positives samples to characterise the circulating lineages. Eleven sequences, including ten new sequences, have been obtained. Our study identified the presence of the PPRV lineage IV in the three studied regions in Burkina Faso with a genetic heterogeneity recorded for the sequences analysed. Previously published data and results of this study suggest that PPRV lineage IV seems to be replacing lineage II in Burkina Faso.

Indexed as

Goat DiseasesPeste-des-Petits-RuminantsPeste-des-petits-ruminants virusAnimalsBurkina FasoGoatsMolecular EpidemiologyPhylogenyRuminantsdiseasefood securitygoatmorbillivirusphylogenyreplacement

Identifiers

PMID38400020
PMCPMC10891519
OpenAlexW4391540717

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.