Evidence map›Paper›PMID 38399455›Full record

ArticlePharmaceuticals (Basel, Switzerland)2024

Identification of SARS-CoV-2 Main Protease Inhibitors Using Chemical Similarity Analysis Combined with Machine Learning.

Karina Eurídice Juárez-Mercado, Milton Abraham Gómez-Hernández, Juana Salinas-Trujano, Luis Córdova-Bahena, Clara Espitia, Sonia Mayra Pérez-Tapia, José L Medina-Franco, Marco A Velasco-Velázquez

Open access · goldAbstract read
In one paragraph

Article in Pharmaceuticals (Basel, Switzerland), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Consensus Pharmacophore Strategy For Identifying Novel SARS-Cov-2 MJournal of chemical information and modeling · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Karina Eurídice Juárez-MercadoDIFACQUIM Research Group, School of Chemistry, Universidad Nacional Autónoma de México, Mexico City 04510, Mexico.ORCID 0000-0002-3283-8284
Milton Abraham Gómez-HernándezSchool of Medicine, Universidad Nacional Autónoma de México, Mexico City 04510, Mexico.ORCID 0000-0003-2280-4934
Juana Salinas-TrujanoResearch and Development in Biotherapeutics Unit (UDIBI), National School of Biological Sciences, Instituto Politécnico Nacional, Mexico City 11350, Mexico.
Luis Córdova-BahenaSchool of Medicine, Universidad Nacional Autónoma de México, Mexico City 04510, Mexico.ORCID 0000-0003-2666-6559
Clara EspitiaImmunology Department, Institute for Biomedical Research, Universidad Nacional Autónoma de México, Mexico City 04510, Mexico.
Sonia Mayra Pérez-TapiaResearch and Development in Biotherapeutics Unit (UDIBI), National School of Biological Sciences, Instituto Politécnico Nacional, Mexico City 11350, Mexico.
José L Medina-FrancoDIFACQUIM Research Group, School of Chemistry, Universidad Nacional Autónoma de México, Mexico City 04510, Mexico.ORCID 0000-0003-4940-1107
Marco A Velasco-VelázquezSchool of Medicine, Universidad Nacional Autónoma de México, Mexico City 04510, Mexico.ORCID 0000-0001-9717-0265
Universidad Nacional Autónoma de México · MXInstituto Politécnico Nacional · MXSecretaría de Ciencia, Humanidades, Tecnología e Innovación · MX

Funding

Universidad Nacional Autónoma de México PAPIIT IN206622Universidad Nacional Autónoma de México PAPIIT IV200121
6 · The paper itself

Abstract

SARS-CoV-2 Main Protease (Mpro) is an enzyme that cleaves viral polyproteins translated from the viral genome, which is critical for viral replication. Mpro is a target for anti-SARS-CoV-2 drug development. Herein, we performed a large-scale virtual screening by comparing multiple structural descriptors of reference molecules with reported anti-coronavirus activity against a library with >17 million compounds. Further filtering, performed by applying two machine learning algorithms, identified eighteen computational hits as anti-SARS-CoV-2 compounds with high structural diversity and drug-like properties. The activities of twelve compounds on Mpro's enzymatic activity were evaluated by fluorescence resonance energy transfer (FRET) assays. Compound

Indexed as

3CLprochemoinformaticsCOVID-19ligand-based drug discoveryMproSARS-CoV-2virtual screening

Identifiers

PMID38399455
PMCPMC10892746
OpenAlexW4391755509

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.