Evidence map›Paper›PMID 38396519›Full record

ArticleAnimals : an open access journal from MDPI2024

Serological and Molecular Characterization of Small Ruminant Lentiviruses in Morocco.

Barbara Colitti, Soukaina Daif, Imane Choukri, Daniela Scalas, Anniken Jerre, Ikhlass El Berbri, Ouafaa Fassi Fihri, Sergio Rosati

Open access · goldAbstract read
In one paragraph

Article in Animals : an open access journal from MDPI, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.4field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Barbara ColittiDepartment of Veterinary Science, University of Turin, Largo Braccini 2, 10095 Grugliasco, TO, Italy.
Soukaina DaifDepartment of Pathology and Veterinary Public Health, Agronomic and Veterinary Institute Hassan II, BP: 6202, Rabat-Institutes, Rabat 10101, Morocco.
Imane ChoukriDepartment of Pathology and Veterinary Public Health, Agronomic and Veterinary Institute Hassan II, BP: 6202, Rabat-Institutes, Rabat 10101, Morocco.
Daniela ScalasDepartment of Veterinary Science, University of Turin, Largo Braccini 2, 10095 Grugliasco, TO, Italy.
Anniken JerreNorwegian Veterinary Institute, P.O. Box 64, 1431 Ås, Norway.
Ikhlass El BerbriDepartment of Pathology and Veterinary Public Health, Agronomic and Veterinary Institute Hassan II, BP: 6202, Rabat-Institutes, Rabat 10101, Morocco.
Ouafaa Fassi FihriDepartment of Pathology and Veterinary Public Health, Agronomic and Veterinary Institute Hassan II, BP: 6202, Rabat-Institutes, Rabat 10101, Morocco.
Sergio RosatiDepartment of Veterinary Science, University of Turin, Largo Braccini 2, 10095 Grugliasco, TO, Italy.ORCID 0000-0002-8315-0316
Institut Agronomique et Vétérinaire Hassan II · MAUniversity of Turin · ITNorwegian Veterinary Institute · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recent studies that investigated the origins of SRLV strains offered new insights into their distribution among domestic ruminants. The aim of the study was to investigate SRLV circulation in Morocco. A total of 51 farms were selected in different geographical locations and tested by screening and genotyping ELISA. Whole blood was used for DNA extraction and nested gag PCR. The sample size allowed for an estimation of prevalence lower than 20% (CI 95%). Surprisingly, a large proportion of screening-positive samples were not correctly serotyped. Sanger and NGS amplicon sequencing approaches allowed us to obtain new sequences even from difficult-to-amplify samples. The serological data support the evidence of an intrinsic difficulty of SRLV to spread, likely due to management practices. The low rate of success by genotyping ELISA led us to suppose that divergent strains might have escaped from diagnostic tools, as partially confirmed by the evidence of an A subtype carrying a mismatch in serotyping epitope. The sequence analysis revealed the circulation of novel B and recombinant A/B subtypes. This study highlights the importance of monitoring viral sequences and their evolution to develop specific diagnostic tests, particularly in countries where control measures are in place.

Indexed as

amplicon sequencingdivergent strainsserotypingsmall ruminant lentiviruses

Identifiers

PMID38396519
PMCPMC10886309
OpenAlexW4391613531

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.