ArticleNature communications2024
Dipterocarpoidae genomics reveal their demography and adaptations to Asian rainforests.
Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.
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Who cites it
6 citing papers in PubMed, 11 citations in OpenAlex.
- Multi-dimensional evidence reveals genetic, demographic and ecological vulnerability in endangered Ormosia microphylla.BMC plant biology · 2026Article
- Population genome-wide analysis reveals historical divergence and adaptive signals in Rubroshorea leprosula (Dipterocarpaceae), a near-threatened tropical forest tree.BMC genomics · 2026Article
- Survival at the edge: genomic vulnerability and genetic purging of a limestone cliff-endemic sky island shrub under climate change.Forestry research · 2026Article
- Pan-mitogenome in Dipterocarpoideae: mitochondrial plastid DNAs and repeats shape the dynamic evolution of mitogenomes.BMC plant biology · 2025Article
- Potential risk of dipterocarps in the marginal Asian rainforests: low population size and high genomic erosion.BMC biology · 2025Article
- Mast seeding is stronger in taller plants.Frontiers in plant science · 2024Article
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Authors and funding
30 authors at 12 institutions in 3 countries.
Funding
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Abstract
Dipterocarpoideae species form the emergent layer of Asian rainforests. They are the indicator species for Asian rainforest distribution, but they are severely threatened. Here, to understand their adaptation and population decline, we assemble high-quality genomes of seven Dipterocarpoideae species including two autotetraploid species. We estimate the divergence time between Dipterocarpoideae and Malvaceae and within Dipterocarpoideae to be 108.2 (97.8‒118.2) and 88.4 (77.7‒102.9) million years ago, and we identify a whole genome duplication event preceding dipterocarp lineage diversification. We find several genes that showed a signature of selection, likely associated with the adaptation to Asian rainforests. By resequencing of two endangered species, we detect an expansion of effective population size after the last glacial period and a recent sharp decline coinciding with the history of local human activities. Our findings contribute to understanding the diversification and adaptation of dipterocarps and highlight anthropogenic disturbances as a major factor in their endangered status.
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