Evidence map›Paper›PMID 38395916›Full record

ArticleNature communications2024

Evolution and expression patterns of the neo-sex chromosomes of the crested ibis.

Lulu Xu, Yandong Ren, Jiahong Wu, Tingting Cui, Rong Dong, Chen Huang, Zhe Feng, Tianmin Zhang, Peng Yang, Jiaqing Yuan and 10 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
7.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Genomic origins and evolution of neo-sex chromosomes in Pacific Island birds.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

20 authors at 5 institutions in 2 countries.

Lulu XuCollege of Life Sciences, Shaanxi Normal University, Xi'an, China.ORCID 0000-0001-7315-4738
Yandong RenCollege of Life Sciences, Shaanxi Normal University, Xi'an, China.
Jiahong WuMOE Key Laboratory of Freshwater Fish Reproduction and Development, School of Life Sciences, Southwest University, Chongqing, China.ORCID 0000-0002-5309-7948
Tingting CuiCollege of Life Sciences, Shaanxi Normal University, Xi'an, China.
Rong DongResearch Center for Qinling Giant Panda, Shaanxi Academy of Forestry, Xi'an, China.
Chen HuangCollege of Life Sciences, Shaanxi Normal University, Xi'an, China.
Zhe FengCollege of Life Sciences, Shaanxi Normal University, Xi'an, China.
Tianmin ZhangCollege of Life Sciences, Shaanxi Normal University, Xi'an, China.
Peng YangCollege of Life Sciences, Shaanxi Normal University, Xi'an, China.
Jiaqing YuanCollege of Life Sciences, Shaanxi Normal University, Xi'an, China.ORCID 0000-0002-0539-3806
Xiao XuCollege of Life Sciences, Shaanxi Normal University, Xi'an, China.
Jiao LiuMOE Key Laboratory of Freshwater Fish Reproduction and Development, School of Life Sciences, Southwest University, Chongqing, China.
Jinhong WangCollege of Life Sciences, Shaanxi Normal University, Xi'an, China.
Wu ChenGuangzhou Wildlife Research Center, Guangzhou Zoo, Guangzhou, China.ORCID 0000-0002-4033-254X
Da MiXi'an Haorui Genomics Technology Co., LTD, Xi'an, China.
David M IrwinDepartment of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, ON, M5S 1A8, Canada.ORCID 0000-0001-6131-4933
Yaping YanCollege of Life Sciences, Shaanxi Normal University, Xi'an, China.
Luohao XuMOE Key Laboratory of Freshwater Fish Reproduction and Development, School of Life Sciences, Southwest University, Chongqing, China. luohaox@gmail.com.ORCID 0000-0002-3714-8047
Xiaoping YuCollege of Life Sciences, Shaanxi Normal University, Xi'an, China. yuxp64@163.com.ORCID 0000-0002-6744-5595
Gang LiCollege of Life Sciences, Shaanxi Normal University, Xi'an, China. gli@snnu.edu.cn.ORCID 0000-0001-7400-5486
Shaanxi Normal University · CNSouthwest University · CNGuangzhou Zoo · CNChina XD Group (China) · CNUniversity of Toronto · CA

Funding

National Natural Science Foundation of China (National Science Foundation of China) 32000383
6 · The paper itself

Abstract

Bird sex chromosomes play a unique role in sex-determination, and affect the sexual morphology and behavior of bird species. Core waterbirds, a major clade of birds, share the common characteristics of being sexually monomorphic and having lower levels of inter-sexual conflict, yet their sex chromosome evolution remains poorly understood. Here, by we analyse of a chromosome-level assembly of a female crested ibis (Nipponia nippon), a typical core waterbird. We identify neo-sex chromosomes resulting from fusion of microchromosomes with ancient sex chromosomes. These fusion events likely occurred following the divergence of Threskiornithidae and Ardeidae. The neo-W chromosome of the crested ibis exhibits the characteristics of slow degradation, which is reflected in its retention of abundant gametologous genes. Neo-W chromosome genes display an apparent ovary-biased gene expression, which is largely driven by genes that are retained on the crested ibis W chromosome but lost in other bird species. These results provide new insights into the evolutionary history and expression patterns for the sex chromosomes of bird species.

Indexed as

BirdsSex ChromosomesAnimalsFemale

Identifiers

PMID38395916
PMCPMC10891136
OpenAlexW4392097661

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.