Evidence map›Paper›PMID 38394468›Full record

ArticleJCO precision oncology2024

Pan-Cancer Interrogation of

Channing J Paller, Hanna Tukachinsky, Alexandra Maertens, Brennan Decker, Julian R Sampson, Jeremy P Cheadle, Emmanuel S Antonarakis

Open access · hybridAbstract read
In one paragraph

Article in JCO precision oncology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
8.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Observational
  14. Genetic predisposition to polyposis syndromes.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2025
    Review
  15. Optimizing genetic testing strategy for suspected attenuated adenomatous polyposis: effective solutions in public health systems.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2025
    Article
  16. Moderate-Low Risk Breast Cancer Gene Expression in a Romanian Population.International journal of molecular sciences · 2025
    Article
  17. Review
  18. Review
  19. A Novel GermlineHuman mutation · 2025
    Article
  20. Overview on biomarkers for immune oncology drugs.Exploration of targeted anti-tumor therapy · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Channing J PallerJohns Hopkins University School of Medicine, Oncology, Baltimore, MD.ORCID 0000-0003-3658-1858
Hanna TukachinskyFoundation Medicine, Beverly, MA.ORCID 0000-0002-0777-7555
Alexandra MaertensJohns Hopkins University, Bloomberg School of Public Health, Center for Alternatives to Animal Testing (CAAT), Baltimore, MD.ORCID 0000-0002-2077-2011
Brennan DeckerFoundation Medicine, Beverly, MA.ORCID 0000-0003-4516-7421
Julian R SampsonInstitute of Medical Genetics, Division of Cancer and Genetics, Cardiff University School of Medicine, Cardiff, United Kingdom.ORCID 0000-0002-2902-2348
Jeremy P CheadleInstitute of Medical Genetics, Division of Cancer and Genetics, Cardiff University School of Medicine, Cardiff, United Kingdom.ORCID 0000-0001-9453-8458
Emmanuel S AntonarakisUniversity of Minnesota Masonic Cancer Center, Division of Hematology, Oncology and Transplantation, Minneapolis, MN.ORCID 0000-0003-0031-9655
Beverly Hospital · USCardiff University · GBJohns Hopkins University · USUniversity of Minnesota Medical Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeBiallelic germline pathogenic variants of the base excision repair (BER) pathway gene MATERIALS AND

methodsData from 354,366 solid tumor biopsies that were sequenced as part of routine clinical care were analyzed using a validated algorithm to distinguish germline from somatic

resultsBiallelic germline pathogenic

conclusionThis analysis of

Indexed as

DNA GlycosylasesExcision RepairNeoplasmsGenetic Predisposition to DiseaseGerm-Line MutationHumansMutationDNA GlycosylasesmutY adenine glycosylase

Identifiers

PMID38394468
PMCPMC10901435
OpenAlexW4392093042

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.