Evidence map›Paper›PMID 38393715›Full record

ArticleInvestigative ophthalmology & visual science2024

Machine Learning-Derived Baseline Visual Field Patterns Predict Future Glaucoma Onset in the Ocular Hypertension Treatment Study.

Rishabh K Singh, Sophie Smith, John Fingert, Mae Gordon, Michael Kass, Todd Scheetz, Ayellet V Segrè, Janey Wiggs, Tobias Elze, Nazlee Zebardast

Open access · goldAbstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 7 institutions in 1 country.

Rishabh K SinghDepartment of Ophthalmology, Columbia University Medical Center, New York, New York, United States.
Sophie SmithTufts University School of Medicine, Boston, Massachusetts, United States.
John FingertCarver College of Medicine, University of Iowa, Iowa City, Iowa, United States.
Mae GordonWashington University School of Medicine, St. Louis, Missouri, United States.
Michael KassWashington University School of Medicine, St. Louis, Missouri, United States.
Todd ScheetzCarver College of Medicine, University of Iowa, Iowa City, Iowa, United States.
Ayellet V SegrèMassachusetts Eye and Ear, Harvard Medical School, Boston, Massachusetts, United States.
Janey WiggsMassachusetts Eye and Ear, Harvard Medical School, Boston, Massachusetts, United States.
Tobias ElzeSchepens Eye Research Institute, Harvard Medical School, Boston, Massachusetts, United States.
Nazlee ZebardastMassachusetts Eye and Ear, Harvard Medical School, Boston, Massachusetts, United States.
Harvard University · USUniversity of Iowa · USWashington University in St. Louis · USColumbia University Irving Medical Center · USMassachusetts Eye and Ear Infirmary · USSmith-Kettlewell Eye Research Institute · USTufts University · US

Funding

VISION RESEARCHP30EY003790 · NEI · SCHEPENS EYE RESEARCH INSTITUTE · PI Tobias Elze · 1985 to 2026
$25.5M
Understanding the clinical impact of cumulative genetic risk to glaucomaR01EY032559 · NEI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Louis Robert Pasquale, Janey L Wiggs · 2021 to 2026
$4.3M
Personalizing Glaucoma Diagnosis by Disease Specific Patterns and Individual Eye AnatomyR01EY030575 · NEI · SCHEPENS EYE RESEARCH INSTITUTE · PI ELZE, TOBIAS · 2019 to 2023
$2.4M
Genetic Factors for Glaucoma in the OHTS; Risk, Progression and MechanismR01EY035266 · NEI · UNIVERSITY OF IOWA · PI JOHN H FINGERT, MAE O GORDON · 2023 to 2026
$1.6M
Glaucoma Risk Prediction Using Machine Learning Integration of Image-Based Phenotypes and Genetic AssociationsK23EY032634 · NEI · MASSACHUSETTS EYE AND EAR INFIRMARY · PI ZEBARDAST, NAZLEE · 2021 to 2024
$1.0M
NEI NIH HHS K23 EY032634NEI NIH HHS P30 EY003790NEI NIH HHS R01 EY030575NEI NIH HHS R01 EY032559NEI NIH HHS R01 EY035266
6 · The paper itself

Abstract

Purpose: The Ocular Hypertension Treatment Study (OHTS) identified risk factors for primary open-angle glaucoma (POAG) in patients with ocular hypertension, including pattern standard deviation (PSD). Archetypal analysis, an unsupervised machine learning method, may offer a more interpretable approach to risk stratification by identifying patterns in baseline visual fields (VFs). Methods: There were 3272 eyes available in the OHTS. Archetypal analysis was applied using 24-2 baseline VFs, and model selection was performed with cross-validation. Decomposition coefficients for archetypes (ATs) were calculated. A penalized Cox proportional hazards model was implemented to select discriminative ATs. The AT model was compared to the OHTS model. Associations were identified between ATs with both POAG onset and VF progression, defined by mean deviation change per year. Results: We selected 8494 baseline VFs. Optimal AT count was 19. The highest prevalence ATs were AT9, AT11, and AT7. The AT-based prediction model had a C-index of 0.75 for POAG onset. Multivariable models demonstrated that a one-interquartile range increase in the AT5 (hazard ratio [HR] = 1.14; 95% confidence interval [CI], 1.04-1.25), AT8 (HR = 1.22; 95% CI, 1.09-1.37), AT15 (HR = 1.26; 95% CI, 1.12-1.41), and AT17 (HR = 1.17; 95% CI, 1.03-1.31) coefficients conferred increased risk of POAG onset. AT5, AT10, and AT14 were significantly associated with rapid VF progression. In a subgroup analysis by high-risk ATs (>95th percentile or <75th percentile coefficients), PSD lost significance as a predictor of POAG in the low-risk group. Conclusions: Baseline VFs, prior to detectable glaucomatous damage, contain occult patterns representing early changes that may increase the risk of POAG onset and VF progression in patients with ocular hypertension. The relationship between PSD and POAG is modified by the presence of high-risk patterns at baseline. An AT-based prediction model for POAG may provide more interpretable glaucoma-specific information in a clinical setting.

Indexed as

Glaucoma, Open-AngleOcular HypertensionOptic DiskHumansIntraocular PressureMachine LearningVision DisordersVisual FieldsVisual Field Tests

Identifiers

PMID38393715
PMCPMC10901249
OpenAlexW4392096241

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.