Evidence map›Paper›PMID 38391751›Full record

ArticleBrain sciences2024

Classification of Hippocampal Ripples: Convolutional Neural Network Learns Episode-Specific Changes.

Yuta Ishihara, Ken'ichi Fujimoto, Hiroshi Murai, Junko Ishikawa, Dai Mitsushima

Abstract read
In one paragraph

Article in Brain sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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0 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Yuta IshiharaGraduate School of Science for Creative Emergence, Kagawa University, Kagawa 761-0396, Japan.ORCID 0009-0009-2977-8717
Ken'ichi FujimotoFaculty of Engineering and Design, Kagawa University, Kagawa 761-0396, Japan.ORCID 0000-0001-8633-5933
Hiroshi MuraiFaculty of Global and Science Studies, Yamaguchi University, Yamaguchi 753-8541, Japan.
Junko IshikawaGraduate School of Medicine, Yamaguchi University, Yamaguchi 755-8505, Japan.
Dai MitsushimaGraduate School of Medicine, Yamaguchi University, Yamaguchi 755-8505, Japan.ORCID 0000-0002-6931-7714

Funding

JSPS KAKENHI Grant Numbers JP23K06793, JP21K02775, JP20K07724, and JP19H03402
6 · The paper itself

Abstract

The hippocampus is known to play an important role in memory by processing spatiotemporal information of episodic experiences. By recording synchronized multiple-unit firing events (ripple firings with 300 Hz-10 kHz) of hippocampal CA1 neurons in freely moving rats, we previously found an episode-dependent diversity in the waveform of ripple firings. In the present study, we hypothesized that changes in the diversity would depend on the type of episode experienced. If this hypothesis holds, we can identify the ripple waveforms associated with each episode. Thus, we first attempted to classify the ripple firings measured from rats into five categories: those experiencing any of the four episodes and those before experiencing any of the four episodes. In this paper, we construct a convolutional neural network (CNN) to classify the current stocks of ripple firings into these five categories and demonstrate that the CNN can successfully classify the ripple firings. We subsequently indicate partial ripple waveforms that the CNN focuses on for classification by applying gradient-weighted class activation mapping (Grad-CAM) to the CNN. The method of t-distributed stochastic neighbor embedding (t-SNE) maps ripple waveforms into a two-dimensional feature space. Analyzing the distribution of partial waveforms extracted by Grad-CAM in a t-SNE feature space suggests that the partial waveforms may be representative of each category.

Indexed as

classificationconvolutional neural networkepisodic experiencegradient-weighted class activation mapping (Grad-CAM)ripple firingst-distributed stochastic neighbor embedding (t-SNE)

Identifiers

PMID38391751
PMCPMC10886971

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.