ArticleNature communications2024
Genomic evidence for rediploidization and adaptive evolution following the whole-genome triplication.
Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.
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Who cites it
33 citing papers in PubMed.
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- Functional divergence of BnaWRKY7 homologs drives phytosterol variations in polyploid Brassica napus.Journal of advanced research · 2026Article
- Post-polyploid chromosomal diploidization in plants is affected by clade divergence and constrained by shared genomic features.Nature communications · 2026Article
- Genome-Wide Analysis of the PEBP Gene Family and Functional Characterization ofInternational journal of molecular sciences · 2026Article
- Genome-Wide Identification and Characterization of thePlants (Basel, Switzerland) · 2026Article
- Genomic insights into the survival code of karst plants.Plant diversity · 2026Article
- Study on the positive regulation of drought tolerance by PdMYB2R032 based on R2R3-MYB gene family analysis in Populus deltoides.BMC plant biology · 2026Article
- Genome Assembly of Three Shrub Mangroves in the Genus Acanthus Reveals Two Polyploidy Events and Expansion of Genes Linked to Root Adaptation in Coastal Habitats.GigaScience · 2026Article
- Genome-wide analysis of the CesA gene family in Brassica napus under abiotic stress and functional study of in root growth.BMC plant biology · 2026Article
- Genome-wide identification and expression divergence of the NDPK gene family inFrontiers in plant science · 2026Article
- Medicago super-pangenome reveals adaptive advantages and evolutionary constraints in autotetraploid alfalfa.Nature communications · 2025Article
- Deciphering Complex Interactions Between LTR Retrotransposons and Three Papaver Species Using LTR_Stream.Genomics, proteomics & bioinformatics · 2025Article
- A near-gapless genome assembly of Pseudocydonia sinensis uncovers unique phenylpropanoid pathways.Plant biotechnology journal · 2025Article
- Genome analyses provide insights intoPlant diversity · 2025Article
- Genome-Wide Identification of theGenes · 2025Article
- Reticulate allopolyploidy and subsequent dysploidy drive evolution and diversification in the cotton family.Nature communications · 2025Article
- Transposon Dynamics Drive Genome Evolution and Regulate Genetic Mechanisms of Agronomic Traits in Cotton.Plants (Basel, Switzerland) · 2025Article
- Construction of Ancestral Chromosomes in Gymnosperms and the Application in Comparative Genomic Analysis.Plants (Basel, Switzerland) · 2025Article
- Genomic Patterns of Loss of Distyly and Polyploidization in Primroses.Molecular biology and evolution · 2025Article
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12 authors.
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Abstract
Whole-genome duplication (WGD), or polyploidy, events are widespread and significant in the evolutionary history of angiosperms. However, empirical evidence for rediploidization, the major process where polyploids give rise to diploid descendants, is still lacking at the genomic level. Here we present chromosome-scale genomes of the mangrove tree Sonneratia alba and the related inland plant Lagerstroemia speciosa. Their common ancestor has experienced a whole-genome triplication (WGT) approximately 64 million years ago coinciding with a period of dramatic global climate change. Sonneratia, adapting mangrove habitats, experienced extensive chromosome rearrangements post-WGT. We observe the WGT retentions display sequence and expression divergence, suggesting potential neo- and sub-functionalization. Strong selection acting on three-copy retentions indicates adaptive value in response to new environments. To elucidate the role of ploidy changes in genome evolution, we improve a model of the polyploidization-rediploidization process based on genomic evidence, contributing to the understanding of adaptive evolution during climate change.
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