Evidence map›Paper›PMID 38387030›Full record

ArticleDiabetes2024

CD4+ T Cells From Individuals With Type 1 Diabetes Respond to a Novel Class of Deamidated Peptides Formed in Pancreatic Islets.

Aïsha Callebaut, Perrin Guyer, Rita Derua, Mijke Buitinga, Anthony Manganaro, Xiaoyan Yi, Fernanda Marques Câmara Sodré, Saurabh Vig, Mara Suleiman, Piero Marchetti and 5 more

Open access · greenAbstract read
In one paragraph

Article in Diabetes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.8field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 3 countries.

Aïsha CallebautLaboratory of Clinical and Experimental Endocrinology, KU Leuven, Leuven, Belgium.
Perrin GuyerCenter for Translational Immunology, Benaroya Research Institute, Seattle, WA.
Rita DeruaLaboratory of Protein Phosphorylation and Proteomics, KU Leuven, Leuven, Belgium.
Mijke BuitingaLaboratory of Clinical and Experimental Endocrinology, KU Leuven, Leuven, Belgium.
Anthony ManganaroDiabetes Center of Excellence, Department of Medicine, University of Massachusetts Chan Medical School, Worcester, MA.
Xiaoyan YiULB Center for Diabetes Research, Medical Faculty, Université Libre de Bruxelles, Brussels, Belgium.
Fernanda Marques Câmara SodréLaboratory of Clinical and Experimental Endocrinology, KU Leuven, Leuven, Belgium.
Saurabh VigLaboratory of Clinical and Experimental Endocrinology, KU Leuven, Leuven, Belgium.
Mara SuleimanDepartment of Clinical and Experimental Medicine, University of Pisa, Pisa, Italy.
Piero MarchettiDepartment of Clinical and Experimental Medicine, University of Pisa, Pisa, Italy.ORCID 0000-0003-4907-0635
Decio L EizirikULB Center for Diabetes Research, Medical Faculty, Université Libre de Bruxelles, Brussels, Belgium.ORCID 0000-0003-2453-5889
Sally C KentDiabetes Center of Excellence, Department of Medicine, University of Massachusetts Chan Medical School, Worcester, MA.
Chantal MathieuLaboratory of Clinical and Experimental Endocrinology, KU Leuven, Leuven, Belgium.ORCID 0000-0002-6099-2406
Eddie A JamesCenter for Translational Immunology, Benaroya Research Institute, Seattle, WA.ORCID 0000-0002-7217-5729
Lut OverberghLaboratory of Clinical and Experimental Endocrinology, KU Leuven, Leuven, Belgium.
KU Leuven · BEBenaroya Research InstituteUniversité Libre de Bruxelles · BEUniversity of Massachusetts Chan Medical School · USUniversity of Pisa · IT

Funding

Humanized Mouse Avatars for T1DU01DK104218 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI BREHM, MICHAEL ALLEN, GREINER, DALE LESLIE · 2019 to 2023
$4.5M
Human Islet-Infiltrating T Cell Biology: Reactivity, Structure, and FunctionUC4DK116284 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI HARLAN, DAVID MARSHALL, KENT, SALLY CHOATE · 2017 to 2017
$2.0M
NIDDK NIH HHS U01 DK104218NIDDK NIH HHS UC4 DK116284
6 · The paper itself

Abstract

The β-cell plays a crucial role in the pathogenesis of type 1 diabetes, in part through the posttranslational modification of self-proteins by biochemical processes such as deamidation. These neoantigens are potential triggers for breaking immune tolerance. We report the detection by LC-MS/MS of 16 novel Gln and 27 novel Asn deamidations in 14 disease-related proteins within inflammatory cytokine-stressed human islets of Langerhans. T-cell clones responsive against one Gln- and three Asn-deamidated peptides could be isolated from peripheral blood of individuals with type 1 diabetes. Ex vivo HLA class II tetramer staining detected higher T-cell frequencies in individuals with the disease compared with control individuals. Furthermore, there was a positive correlation between the frequencies of T cells specific for deamidated peptides, insulin antibody levels at diagnosis, and duration of disease. These results highlight that stressed human islets are prone to enzymatic and biochemical deamidation and suggest that both Gln- and Asn-deamidated peptides can promote the activation and expansion of autoreactive CD4+ T cells. These findings add to the growing evidence that posttranslational modifications undermine tolerance and may open the road for the development of new diagnostic and therapeutic applications for individuals living with type 1 diabetes. ARTICLE HIGHLIGHTS:

Indexed as

Diabetes Mellitus, Type 1Islets of LangerhansCD4-Positive T-LymphocytesChromatography, LiquidHumansPeptidesTandem Mass SpectrometryPeptides

Identifiers

PMID38387030
PMCPMC11043062
OpenAlexW4392023044

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.