Evidence map›Paper›PMID 38386926›Full record

ArticleCancer discovery2024

Acquired Cross-Resistance in Small Cell Lung Cancer due to Extrachromosomal DNA Amplification of MYC Paralogs.

Shreoshi Pal Choudhuri, Luc Girard, Jun Yi Stanley Lim, Jillian F Wise, Braeden Freitas, Di Yang, Edmond Wong, Seth Hamilton, Victor D Chien, Yoon Jung Kim and 15 more

Open access · hybridAbstract read
In one paragraph

Article in Cancer discovery, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
15.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 54 citations in OpenAlex.

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  12. The Impact of Targeting TRAF2 and NCK-Interacting Protein Kinase on Antitumor Effect and Tumor Immune Environment in c-MYC-High SCLC.Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer · 2026
    Article
  13. Review
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  15. Fast and accurate resolution of ecDNA sequence using Cycle-Extractor.bioRxiv : the preprint server for biology · 2026
    Article
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  20. bioRxiv : the preprint server for biology · 2026
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

25 authors at 6 institutions in 1 country.

Shreoshi Pal ChoudhuriHamon Center for Therapeutic Oncology Research, University of Texas Southwestern Medical Center, Dallas, Texas.ORCID 0000-0003-1600-7664
Luc GirardHamon Center for Therapeutic Oncology Research, University of Texas Southwestern Medical Center, Dallas, Texas.ORCID 0000-0002-6688-5281
Jun Yi Stanley LimChildren's Medical Center Research Institute, University of Texas Southwestern Medical Center, Dallas, Texas.ORCID 0000-0003-4160-7434
Jillian F WiseMassachusetts General Hospital Cancer Center, Krantz Family Center for Cancer Research, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0002-2575-869X
Braeden FreitasHamon Center for Therapeutic Oncology Research, University of Texas Southwestern Medical Center, Dallas, Texas.ORCID 0009-0005-2512-9112
Di YangHamon Center for Therapeutic Oncology Research, University of Texas Southwestern Medical Center, Dallas, Texas.ORCID 0000-0003-2625-3746
Edmond WongMassachusetts General Hospital Cancer Center, Krantz Family Center for Cancer Research, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0001-6037-7377
Seth HamiltonHamon Center for Therapeutic Oncology Research, University of Texas Southwestern Medical Center, Dallas, Texas.ORCID 0009-0008-3841-7799
Victor D ChienHamon Center for Therapeutic Oncology Research, University of Texas Southwestern Medical Center, Dallas, Texas.ORCID 0000-0003-0279-7239
Yoon Jung KimChildren's Medical Center Research Institute, University of Texas Southwestern Medical Center, Dallas, Texas.ORCID 0000-0002-2942-294X
Collin GilbreathChildren's Medical Center Research Institute, University of Texas Southwestern Medical Center, Dallas, Texas.ORCID 0000-0002-8683-983X
Jun ZhongMassachusetts General Hospital Cancer Center, Krantz Family Center for Cancer Research, Harvard Medical School, Boston, Massachusetts.ORCID 0009-0007-2813-6865
Sarah PhatMassachusetts General Hospital Cancer Center, Krantz Family Center for Cancer Research, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0003-4532-0967
David T MyersMassachusetts General Hospital Cancer Center, Krantz Family Center for Cancer Research, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0001-9705-4213
Camilla L ChristensenDana-Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts.ORCID 0009-0007-3313-2615
Hanieh Mazloom-FarsibafLyda Hill Department of Bioinformatics, University of Texas Southwestern Medical Center, Dallas, Texas.ORCID 0000-0002-2571-0418
Marcello StanzioneMassachusetts General Hospital Cancer Center, Krantz Family Center for Cancer Research, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0001-5842-8649
Kwok-Kin WongPerlmutter Cancer Center, NYU Langone Health, New York, New York.ORCID 0000-0001-6323-235X
Yin P HungMassachusetts General Hospital Cancer Center, Krantz Family Center for Cancer Research, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0002-8568-1591
Anna F FaragoMassachusetts General Hospital Cancer Center, Krantz Family Center for Cancer Research, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0001-6193-039X
Catherine B MeadorMassachusetts General Hospital Cancer Center, Krantz Family Center for Cancer Research, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0001-5006-3569
Nicholas J DysonMassachusetts General Hospital Cancer Center, Krantz Family Center for Cancer Research, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0001-8119-5513
Michael S Lawrence *Massachusetts General Hospital Cancer Center, Krantz Family Center for Cancer Research, Harvard Medical School, Boston, Massachusetts.ORCID 0000-0002-1307-459X
Sihan Wu *Children's Medical Center Research Institute, University of Texas Southwestern Medical Center, Dallas, Texas.ORCID 0000-0001-8329-7492
Benjamin J Drapkin *Hamon Center for Therapeutic Oncology Research, University of Texas Southwestern Medical Center, Dallas, Texas.ORCID 0000-0002-4824-7243
The University of Texas Southwestern Medical Center · USCenter for Cancer Research · USBroad Institute · USDana-Farber Cancer Institute · USMassachusetts General Hospital · USNYU Langone Health · US

Funding

UNIVERSITY OF TEXAS--SPORE IN LUNG CANCERP50CA070907 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI GIBBONS, DON LYNN · 1996 to 2024
$57.4M
UT Southwestern Medical Center Simmons Comprehensive Cancer CenterP30CA142543 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI Sandi Leigh Pruitt · 2010 to 2026
$53.7M
eDyNAmiC - STANFORDOT2CA278688 · NCI · STANFORD UNIVERSITY · PI PAUL S MISCHEL · 2022 to 2026
$7.7M
UTSW-UNC Center for Cell Signaling AnalysisRM1GM145399 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI Kevin Michael Dean, Klaus M. Hahn · 2022 to 2026
$6.2M
Using patient-derived models to understand drug responses in SCLCU01CA220323 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI DYSON, NICHOLAS J · 2018 to 2022
$3.1M
eDyNAmiC-TEXASSWOT2CA278683 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI Zhijian J Chen · 2022 to 2026
$2.4M
Dissecting and overcoming cross-resistance to DNA damaging agents in SCLCK08CA237832 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI DRAPKIN, BENJAMIN J · 2020 to 2024
$1.2M
Cancer Research UK CGCATF-2021/100012NCI NIH HHS K08 CA237832NCI NIH HHS OT2 CA278683NCI NIH HHS OT2 CA278688NCI NIH HHS P30 CA142543NCI NIH HHS P50 CA070907NCI NIH HHS U01 CA220323NIGMS NIH HHS RM1 GM145399
6 · The paper itself

Abstract

Small cell lung cancer (SCLC) presents as a highly chemosensitive malignancy but acquires cross-resistance after relapse. This transformation is nearly inevitable in patients but has been difficult to capture in laboratory models. Here, we present a preclinical system that recapitulates acquired cross-resistance, developed from 51 patient-derived xenograft (PDX) models. Each model was tested in vivo against three clinical regimens: cisplatin plus etoposide, olaparib plus temozolomide, and topotecan. These drug-response profiles captured hallmark clinical features of SCLC, such as the emergence of treatment-refractory disease after early relapse. For one patient, serial PDX models revealed that cross-resistance was acquired through MYC amplification on extrachromosomal DNA (ecDNA). Genomic and transcriptional profiles of the full PDX panel revealed that MYC paralog amplifications on ecDNAs were recurrent in relapsed cross-resistant SCLC, and this was corroborated in tumor biopsies from relapsed patients. We conclude that ecDNAs with MYC paralogs are recurrent drivers of cross-resistance in SCLC. SIGNIFICANCE: SCLC is initially chemosensitive, but acquired cross-resistance renders this disease refractory to further treatment and ultimately fatal. The genomic drivers of this transformation are unknown. We use a population of PDX models to discover that amplifications of MYC paralogs on ecDNA are recurrent drivers of acquired cross-resistance in SCLC. This article is featured in Selected Articles from This Issue, p. 695.

Indexed as

Drug Resistance, NeoplasmGene AmplificationLung NeoplasmsSmall Cell Lung CarcinomaAnimalsHumansMiceProto-Oncogene Proteins c-mycXenograft Model Antitumor AssaysProto-Oncogene Proteins c-myc

Identifiers

PMID38386926
PMCPMC11061613
OpenAlexW4392086654

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.