Evidence map›Paper›PMID 38386640›Full record

ArticlePloS one2024

Unravelling the novel genetic diversity and marker-trait associations of corn leaf aphid resistance in wheat using microsatellite markers.

Jayant Yadav, Poonam Jasrotia, Maha Singh Jaglan, Sindhu Sareen, Prem Lal Kashyap, Sudheer Kumar, Surender Singh Yadav, Gyanendra Singh, Gyanendra Pratap Singh

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Jayant YadavICAR- Indian Institute of Wheat and Barley Research, Karnal, Haryana, India.ORCID 0000-0002-6229-1873
Poonam JasrotiaICAR- Indian Institute of Wheat and Barley Research, Karnal, Haryana, India.ORCID 0000-0001-5615-8956
Maha Singh JaglanCCS Haryana Agricultural University, Hisar, Haryana, India.
Sindhu SareenICAR- Indian Institute of Wheat and Barley Research, Karnal, Haryana, India.
Prem Lal KashyapICAR- Indian Institute of Wheat and Barley Research, Karnal, Haryana, India.ORCID 0000-0002-1405-4814
Sudheer KumarICAR- Indian Institute of Wheat and Barley Research, Karnal, Haryana, India.
Surender Singh YadavCCS Haryana Agricultural University, Hisar, Haryana, India.
Gyanendra SinghICAR- Indian Institute of Wheat and Barley Research, Karnal, Haryana, India.
Gyanendra Pratap SinghICAR- Indian Institute of Wheat and Barley Research, Karnal, Haryana, India.
Indian Institute of Wheat and Barley Research · INChaudhary Charan Singh Haryana Agricultural University · INNational Bureau of Plant Genetic Resources · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The study was conducted to identify novel simple sequence repeat (SSR) markers associated with resistance to corn aphid (CLA), Rhopalosiphum maidis L. in 48 selected bread wheat (Triticum aestivum L.) and wild wheat (Aegilops spp. & T. dicoccoides) genotypes during two consecutive cropping seasons (2018-19 and 2019-20). A total of 51 polymorphic markers containing 143 alleles were used for the analysis. The frequency of the major allele ranged from 0.552 (Xgwm113) to 0.938 (Xcfd45, Xgwm194 and Xgwm526), with a mean of 0.731. Gene diversity ranged from 0.116 (Xgwm526) to 0.489 (Xgwm113), with a mean of 0.354. The polymorphic information content (PIC) value for the SSR markers ranged from 0.107 (Xgwm526) to 0.370 (Xgwm113) with a mean of 0.282. The results of the STRUCTURE analysis revealed the presence of four main subgroups in the populations. Analysis of molecular variance (AMOVA) showed that the between-group difference was around 37 per cent of the total variation contributed to the diversity by the whole germplasm, while 63 per cent of the variation was attributed between individuals within the group. A general linear model (GLM) was used to identify marker-trait associations, which detected a total of 23 and 27 significant new marker-trait associations (MTAs) at the p < 0.01 significance level during the 2018-19 and 2019-20 crop seasons, respectively. The findings of this study have important implications for the identification of molecular markers associated with CLA resistance. These markers can increase the accuracy and efficiency of aphid-resistant germplasm selection, ultimately facilitating the transfer of resistance traits to desirable wheat genotypes.

Indexed as

AphidsTriticumAnimalsGenetic VariationHumansMicrosatellite RepeatsZea mays

Identifiers

PMID38386640
PMCPMC10883527
OpenAlexW4392028852

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.