Evidence map›Paper›PMID 38386212›Full record

ArticleBiochemical genetics2024

Molecular Identification and Characterization of Hevein Antimicrobial Peptide Genes in Two-Row and Six-Row Cultivars of Barley (Hordeum vulgare L.).

Reza Mir Drikvand, Seyyed Mohsen Sohrabi, Seyed Sajad Sohrabi, Kamran Samiei

Abstract read
PubMed Publisher
In one paragraph

Article in Biochemical genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Reza Mir DrikvandDepartment of Plant Genetics and Breeding, Islamic Azad University, Khorramabad Branch, Khorramabad, Iran. drikvand_r@yahoo.com.ORCID http://orcid.org/0000-0001-5702-6779
Seyyed Mohsen SohrabiDepartment of Production Engineering and Plant Genetics, Faculty of Agriculture, Shahid Chamran University, Ahvaz, Iran.ORCID http://orcid.org/0000-0002-7813-0820
Seyed Sajad SohrabiDepartment of Production Engineering and Plant Genetics, Faculty of Agriculture, Lorestan University, Khorramabad, Iran.ORCID http://orcid.org/0000-0002-7528-5886
Kamran SamieiDepartment of Plant Genetics and Breeding, Islamic Azad University, Khorramabad Branch, Khorramabad, Iran.ORCID http://orcid.org/0000-0002-4540-9171
Islamic Azad University, Khorramabad Branch · IRShahid Chamran University of Ahvaz · IR

Funding

Islamic Azad University, Khorramabad Branch 2511/D/3913
6 · The paper itself

Abstract

Heveins are one of the most important groups of plant antimicrobial peptides. So far, various roles in plant growth and development and in response to biotic and abiotic stresses have reported for heveins. The present study aimed to identify and characterize the hevein genes in two-row and six-row cultivars of barley. In total, thirteen hevein genes were identified in the genome of two-row and six-row cultivars of barley. The identified heveins were identical in two-row and six-row cultivars of barley and showed a high similarity with heveins from other plant species. The hevein coding sequences produced open reading frames (ORFs) ranged from 342 to 1002 bp. Most of the identified hevein genes were intronless, and the others had only one intron. The hevein ORFs produced proteins ranged from 113 to 333 amino acids. Search for conserved functional domains showed CBD and LYZ domains in barley heveins. All barley heveins comprised extracellular signal peptides ranged from 19 to 35 amino acids. The phylogenetic analysis divided barley heveins into two groups. The promoter analysis showed regulatory elements with different frequencies between two-row and six-row cultivars. These cis-acting elements included elements related to growth and development, hormone response, and environmental stresses. The expression analysis showed high expression level of heveins in root and reproductive organs of both two-row and six-row cultivars. The expression analysis also showed that barley heveins is induced by both biotic and abiotic stresses. The results of antimicrobial activity prediction showed the highest antimicrobial activity in CBD domain of barley heveins. The findings of the current study can improve our knowledge about the role of hevein genes in plant and can be used for future studies.

Indexed as

HordeumPhylogenyAmino Acid SequenceAntimicrobial Cationic PeptidesAntimicrobial PeptidesGene Expression Regulation, PlantGenes, PlantOpen Reading FramesPlant LectinsPlant ProteinsAntimicrobial Cationic PeptidesAntimicrobial PeptidesheveinPlant LectinsPlant ProteinsAntimicrobial peptidesBarleyBiotic and abiotic stressesGene familyHevein

Identifiers

PMID38386212
OpenAlexW4392079606

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.