Evidence map›Paper›PMID 38384837›Full record

ArticleiScience2024

Fallopian tube single cell analysis reveals myeloid cell alterations in high-grade serous ovarian cancer.

Joshua Brand, Marcela Haro, Xianzhi Lin, B J Rimel, Stephanie M McGregor, Kate Lawrenson, Huy Q Dinh

Open access · goldAbstract read
In one paragraph

Article in iScience, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
5.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Joshua BrandMcArdle Laboratory for Cancer Research, Department of Oncology, School of Medicine and Public Health, University of Wisconsin - Madison, Madison, WI 53705, USA.
Marcela HaroWomen's Cancer Research Program at the Samuel Oschin Comprehensive Cancer Center, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA.
Xianzhi LinWomen's Cancer Research Program at the Samuel Oschin Comprehensive Cancer Center, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA.
B J RimelWomen's Cancer Research Program at the Samuel Oschin Comprehensive Cancer Center, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA.
Stephanie M McGregorDepartment of Pathology and Laboratory Medicine, University of Wisconsin - Madison, Madison, WI 53705, USA.
Kate LawrensonWomen's Cancer Research Program at the Samuel Oschin Comprehensive Cancer Center, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA.
Huy Q DinhMcArdle Laboratory for Cancer Research, Department of Oncology, School of Medicine and Public Health, University of Wisconsin - Madison, Madison, WI 53705, USA.
Cedars-Sinai Medical Center · USUniversity of Wisconsin–Madison · US

Funding

Genomic and Transcriptomic Analysis of Breast and Ovarian CancersR01CA211574 · NCI · UNIVERSITY OF VIRGINIA · PI GAYTHER, SIMON ANDREW, SCHILDKRAUT, JOELLEN M. · 2018 to 2022
$3.1M
Graduate Training in Cellular and Molecular Pathogenesis of Human DiseasesT32GM135119 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI Zsuzsanna Fabry · 2020 to 2026
$2.2M
NCI NIH HHS R01 CA211574NIGMS NIH HHS T32 GM135119
6 · The paper itself

Abstract

Most high-grade serous ovarian cancers (HGSCs) likely initiate from fallopian tube (FT) epithelia. While epithelial subtypes have been characterized using single-cell RNA-sequencing (scRNA-Seq), heterogeneity of other compartments and their involvement in tumor progression are poorly defined. Integrated analysis of human FT scRNA-Seq and HGSC-related tissues, including tumors, revealed greater immune and stromal transcriptional diversity than previously reported. We identified abundant monocytes in FTs across two independent cohorts. The ratio of macrophages to monocytes is similar between benign FTs, ovaries, and adjacent normal tissues but significantly greater in tumors. FT-defined monocyte and macrophage signatures, cell-cell communication, and gene set enrichment analyses identified monocyte- and macrophage-specific interactions and functional pathways in paired tumors and adjacent normal tissues. Further reanalysis of HGSC scRNA-Seq identified monocyte and macrophage subsets associated with neoadjuvant chemotherapy. Taken together, our work provides data that an altered FT myeloid cell composition could inform the discovery of early detection markers for HGSC.

Indexed as

CancerImmunologyMicroenvironmentTranscriptomics

Identifiers

PMID38384837
PMCPMC10879678
OpenAlexW4391116579

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.