Evidence map›Paper›PMID 38384724›Full record

ArticleAnimal reproduction2024

Genome-wide association study of Nelore and Angus heifers with low and high ovarian follicle counts.

Bárbara Loureiro, Ronaldo Luiz Ereno, Antônio Guilherme Roncada Pupulim, Maria Clara Viana Barroso Tramontana, Henrique Passos Tabosa, Ciro Moraes Barros, Maurício Gomes Favoreto

Open access · greenAbstract read
In one paragraph

Article in Animal reproduction, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Selection Signatures in the Genome of Dzhalgin Merino Sheep Breed.Animals : an open access journal from MDPI · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Bárbara LoureiroLaboratório de Fisiologia da Reprodução Animal, Universidade Vila Velha - UVV, Vila Velha, ES, Brasil.ORCID 0000-0003-3705-0709
Ronaldo Luiz ErenoDepartamento de Farmacologia, Instituto de Biociências, Universidade Estadual Paulista - UNESP, Botucatu, SP, Brasil.ORCID 0000-0001-6287-3171
Antônio Guilherme Roncada PupulimDepartamento de Farmacologia, Instituto de Biociências, Universidade Estadual Paulista - UNESP, Botucatu, SP, Brasil.ORCID 0000-0002-7059-9456
Maria Clara Viana Barroso TramontanaLaboratório de Fisiologia da Reprodução Animal, Universidade Vila Velha - UVV, Vila Velha, ES, Brasil.
Henrique Passos TabosaLaboratório de Fisiologia da Reprodução Animal, Universidade Vila Velha - UVV, Vila Velha, ES, Brasil.ORCID 0000-0008-4348-5829
Ciro Moraes BarrosDepartamento de Farmacologia, Instituto de Biociências, Universidade Estadual Paulista - UNESP, Botucatu, SP, Brasil.ORCID 0000-0001-6977-706X
Maurício Gomes FavoretoLaboratório de Fisiologia da Reprodução Animal, Universidade Vila Velha - UVV, Vila Velha, ES, Brasil.ORCID 0000-0003-4869-8922
Universidade Vila Velha · BRUniversidade Estadual Paulista (Unesp) · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The number of antral follicles is considered an important fertility trait because animals with a high follicle count (HFC) produce more oocytes and embryos per cycle. Identification of these animals by genetic markers such as single nucleotide polymorphisms (SNPs) can accelerate selection of future generations. The aim of this study was to perform a genome wide association study (GWAS) on Nelore and Angus heifers with HFC and low (LFC) antral follicle counts. The groups HFC and LFC for genotyping were formed based on the average of total follicles (≥ 3 mm) counted in each breed consistently ± standard deviation. A total of 72 Nelore heifers (32 HFC and 40 LFC) and 48 Angus heifers (21 HFC and 27 LFC) were selected and the DNA was extracted from blood and hair bulb. Genotyping was done using the Illumina Bovine HD 770K BeadChip. The GWAS analysis showed 181 and 201 SNPs with genotype/phenotype association (P ≤ 0.01) in Nelore and Angus heifers, respectively. Functional enrichment analysis was performed on candidate genes that were associated with SNPs. A total of 97 genes were associated to the 181 SNPs in the Nelore heifers and the functional analysis identified genes (ROBO1 and SLIT3) in the ROBO-SLIT pathway that can be involved in the control of germ cell migration in the ovary as it is involved in lutheal cell migration and fetal ovary development. In the Angus heifers, 57 genes were associated with the 201 SNPs, highlighting Fribilin 1 (FBN1) gene, involved in regulation of growth factors directly involved in follicle activation and development. In summary, GWAS for Nelore and Angus heifers showed SNPs associated with higher follicle count phenotype. Furthermore, these findings offer valuable insights for the further investigation of potential mechanism involved in follicle formation and development, important for breeding programs for both breeds.

Indexed as

Bovine HD 770 K SNPcandidate genesfolliclereproductionSNPs

Identifiers

PMID38384724
PMCPMC10878542
OpenAlexW4394764712

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.