Evidence map›Paper›PMID 38384512›Full record

ArticleHeliyon2024

Improved lung cancer classification by employing diverse molecular features of microRNAs.

Shiyong Guo, Chunyi Mao, Jun Peng, Shaohui Xie, Jun Yang, Wenping Xie, Wanran Li, Huaide Yang, Hao Guo, Zexuan Zhu and 1 more

Abstract read
In one paragraph

Article in Heliyon, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Shiyong GuoState Key Laboratory of Primate Biomedical Research; Institute of Primate Translational Medicine, Kunming University of Science and Technology, Kunming, Yunnan 650500, China.
Chunyi MaoState Key Laboratory of Primate Biomedical Research; Institute of Primate Translational Medicine, Kunming University of Science and Technology, Kunming, Yunnan 650500, China.
Jun PengDepartment of Thoracic Surgery, The First People's Hospital of Yunnan Province, i.e., The Affiliated Hospital of Kunming University of Science and Technology, Kunming, Yunnan 650032, China.
Shaohui XieCollege of Computer Science and Software Engineering, Shenzhen University, Shenzhen, Guangdong 518060, China.
Jun YangSchool of Criminal Investigation, Yunnan Police College, Kunming, Yunnan 650223, China.
Wenping XieCollege of Horticulture and Landscape, Yunnan Agricultural University, Kunming, Yunnan, 650201, China.
Wanran LiCollege of Horticulture and Landscape, Yunnan Agricultural University, Kunming, Yunnan, 650201, China.
Huaide YangCollege of Horticulture and Landscape, Yunnan Agricultural University, Kunming, Yunnan, 650201, China.
Hao GuoDepartment of Cardiology, The First Affiliated Hospital of Kunming Medical University, Kunming, Yunnan 650032, China.
Zexuan ZhuNational Engineering Laboratory for Big Data System Computing Technology, Shenzhen University, Shenzhen, Guangdong 518060, China.
Yun ZhengCollege of Horticulture and Landscape, Yunnan Agricultural University, Kunming, Yunnan, 650201, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MiRNAs are edited or modified in multiple ways during their biogenesis pathways. It was reported that miRNA editing was deregulated in tumors, suggesting the potential value of miRNA editing in cancer classification. Here we extracted three types of miRNA features from 395 LUAD and control samples, including the abundances of original miRNAs, the abundances of edited miRNAs, and the editing levels of miRNA editing sites. Our results show that eight classification algorithms selected generally had better performances on combined features than on the abundances of miRNAs or editing features of miRNAs alone. One feature selection algorithm, i.e., the DFL algorithm, selected only three features, i.e., the frequencies of hsa-miR-135b-5p, hsa-miR-210-3p and hsa-mir-182_48u (an edited miRNA), from 316 training samples. Seven classification algorithms achieved 100% accuracies on these three features for 79 independent testing samples. These results indicate that the additional information of miRNA editing is useful in improving the classification of LUAD samples.

Indexed as

ClassificationFeature selectionLung adenocarcinomaMicroRNA (miRNA)MiRNA editing

Identifiers

PMID38384512
PMCPMC10878959

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.