Evidence map›Paper›PMID 38384302›Full record

ReviewFrontiers in cellular and infection microbiology2024

Fine-tuning of post-weaning pig microbiome structure and functionality by in-feed zinc oxide and antibiotics use.

Juan M Ortiz Sanjuán, Edgar G Manzanilla, Raúl Cabrera-Rubio, Fiona Crispie, Paul D Cotter, Juan J Garrido, Daniel Ekhlas, Lorcan O'Neill, Héctor Argüello

Open access · goldAbstract readReview
In one paragraph

Review in Frontiers in cellular and infection microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 2 countries.

Juan M Ortiz SanjuánPig Development Department, Teagasc Grassland Research and Innovation Centre, Moorepark, Cork, Ireland.
Edgar G ManzanillaPig Development Department, Teagasc Grassland Research and Innovation Centre, Moorepark, Cork, Ireland.
Raúl Cabrera-RubioTeagasc Food Research Centre, Moorepark, Cork, Ireland.
Fiona CrispieTeagasc Food Research Centre, Moorepark, Cork, Ireland.
Paul D CotterTeagasc Food Research Centre, Moorepark, Cork, Ireland.
Juan J GarridoGrupo de Genómica y Mejora Animal, Departamento de Genética, Facultad de Veterinaria, Universidad de Córdoba, Córdoba, Spain.
Daniel EkhlasPig Development Department, Teagasc Grassland Research and Innovation Centre, Moorepark, Cork, Ireland.
Lorcan O'NeillPig Development Department, Teagasc Grassland Research and Innovation Centre, Moorepark, Cork, Ireland.
Héctor ArgüelloDepartamento de Sanidad Animal, Facultad de Veterinaria, Universidad de León, León, Spain.
Teagasc - The Irish Agriculture and Food Development Authority · IEUniversity College Dublin · IEScience Foundation Ireland · IEUniversidad de León · ESUniversity College Cork · IEUniversity of Córdoba · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Post-weaning diarrhoea (PWD) is a multifactorial disease that affects piglets after weaning, contributing to productive and economic losses. Its control includes the use of in-feed prophylactic antibiotics and therapeutic zinc oxide (ZnO), treatments that, since 2022, are no longer permitted in the European Union due to spread of antimicrobial resistance genes and pollution of soil with heavy metals. A dysbiosis in the microbiota has been suggested as a potential risk factor of PWD onset. Understanding pig's microbiota development around weaning and its changes in response to ZnO and antibiotics is crucial to develop feasible alternatives to prophylactic and metaphylactic antimicrobial use. Methods: This study used shotgun metagenomic sequencing to investigate the environmental and faecal microbiota on 10 farms using (Treated) or not using (ZnO-free) in-feed antibiotics and ZnO during the first 14 days post-weaning (dpw). Environmental samples from clean pens were collected at weaning day (0dpw), and faecal samples at 0, 7 and 14dpw. Diarrhoeic faecal samples were collected at 7dpw when available. Results: The analysis of data revealed that the faecal microbiota composition and its functionality was impacted by the sampling time point (microbiota maturation after weaning) but not by the farm environment. Treatment with antibiotics and ZnO showed no effects on diversity indices while the analyses of microbiota taxonomic and functional profiles revealed increased abundance of taxa and metabolic functions associated with Discussion: The results provide a comprehensive overview of the beneficial effects of ZnO and antibiotics in PWD in the microbiota transition after weaning, preventing the overgrowth of pathogens such as pathogenic

Indexed as

MicrobiotaZinc OxideAnimalsAnti-Bacterial AgentsDiarrheaEscherichia coliSwineAnti-Bacterial AgentsZinc Oxideantimicrobialenvironmentmicrobiomepigletspost-weaning diarrheaweaningzinc oxide

Identifiers

PMID38384302
PMCPMC10879578
OpenAlexW4391610380

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.