Evidence map›Paper›PMID 38383849›Full record

ArticleNature ecology & evolution2024

Genomics of post-bottleneck recovery in the northern elephant seal.

A Rus Hoelzel, Georgios A Gkafas, Hui Kang, Fatih Sarigol, Burney Le Boeuf, Daniel P Costa, Roxanne S Beltran, Joanne Reiter, Patrick W Robinson, Nancy McInerney and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Nature ecology & evolution, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
11.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 24 citations in OpenAlex.

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  5. Methylation-associated mutagenesis underlies variation in the mutation spectrum across eukaryotes.Proceedings of the National Academy of Sciences of the United States of America · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 4 countries.

A Rus HoelzelBiosciences, Durham University, Durham, UK. a.r.hoelzel@dur.ac.uk.ORCID http://orcid.org/0000-0002-7265-4180
Georgios A Gkafas *Department of Ichthyology and Aquatic Environment, University of Thessaly, Volos, Greece.ORCID http://orcid.org/0000-0002-6410-682X
Hui Kang *Marine Mammal and Marine Bioacoustics Laboratory, Institute of Deep-sea Science and Engineering, Chinese Academy of Sciences, Sanya, China.
Fatih Sarigol *Biosciences, Durham University, Durham, UK.ORCID http://orcid.org/0000-0002-5842-6114
Burney Le BoeufEcology and Evolutionary Biology, University of California, Santa Cruz, CA, USA.
Daniel P CostaEcology and Evolutionary Biology, University of California, Santa Cruz, CA, USA.ORCID http://orcid.org/0000-0002-0233-5782
Roxanne S BeltranEcology and Evolutionary Biology, University of California, Santa Cruz, CA, USA.
Joanne ReiterEcology and Evolutionary Biology, University of California, Santa Cruz, CA, USA.ORCID http://orcid.org/0009-0009-1215-940X
Patrick W RobinsonEcology and Evolutionary Biology, University of California, Santa Cruz, CA, USA.
Nancy McInerneyCenter for Conservation Genomics, National Zoo and Conservation Biology Institute, Smithsonian Institution, Washington, DC, USA.ORCID http://orcid.org/0000-0002-6519-7671
Inge SeimMarine Mammal and Marine Bioacoustics Laboratory, Institute of Deep-sea Science and Engineering, Chinese Academy of Sciences, Sanya, China.ORCID http://orcid.org/0000-0001-8594-7217
Shuai SunBGI Research, Qingdao, China. sunshuai@genomics.cn.ORCID http://orcid.org/0000-0003-1092-3186
Guangyi FanBGI Research, Qingdao, China. fanguangyi@genomics.cn.ORCID http://orcid.org/0000-0001-7365-1590
Songhai LiMarine Mammal and Marine Bioacoustics Laboratory, Institute of Deep-sea Science and Engineering, Chinese Academy of Sciences, Sanya, China. lish@idsse.ac.cn.ORCID http://orcid.org/0000-0003-4977-1722
University of California, Santa Cruz · USBGI Group (China) · CNChinese Academy of Sciences · CNDurham University · GBNanjing Normal University · CNSmithsonian Institution · USUniversity of Thessaly · GR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Populations and species are threatened by human pressure, but their fate is variable. Some depleted populations, such as that of the northern elephant seal (Mirounga angustirostris), recover rapidly even when the surviving population was small. The northern elephant seal was hunted extensively and taken by collectors between the early 1800s and 1892, suffering an extreme population bottleneck as a consequence. Recovery was rapid and now there are over 200,000 individuals. We sequenced 260 modern and 8 historical northern elephant seal nuclear genomes to assess the impact of the population bottleneck on individual northern elephant seals and to better understand their recovery. Here we show that inbreeding, an increase in the frequency of alleles compromised by lost function, and allele frequency distortion, reduced the fitness of breeding males and females, as well as the performance of adult females on foraging migrations. We provide a detailed investigation of the impact of a severe bottleneck on fitness at the genomic level and report on the role of specific gene systems.

Indexed as

GenomicsSeals, EarlessAnimalsBase SequenceFemaleHumansMale

Identifiers

PMID38383849
PMCPMC11009102
OpenAlexW4391997434

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.