Evidence map›Paper›PMID 38383518›Full record

ArticleNature communications2024

Global evaluation of lineage-specific human papillomavirus capsid antigenicity using antibodies elicited by natural infection.

Gathoni Kamuyu, Filomeno Coelho da Silva, Vanessa Tenet, John Schussler, Anna Godi, Rolando Herrero, Carolina Porras, Lisa Mirabello, John T Schiller, Mónica S Sierra and 3 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Gathoni KamuyuVirus Reference Department, Public Health Microbiology Division, UK Health Security Agency, London, UK.
Filomeno Coelho da SilvaVirus Reference Department, Public Health Microbiology Division, UK Health Security Agency, London, UK.
Vanessa TenetInternational Agency for Research on Cancer (IARC/WHO) Early Detection, Prevention and Infections Branch, Lyon, France.
John SchusslerInformation Management Services Inc, Silver Spring, MD, USA.ORCID 0000-0002-8793-0766
Anna GodiVirus Reference Department, Public Health Microbiology Division, UK Health Security Agency, London, UK.
Rolando HerreroAgencia Costarricense de Investigaciones Biomédicas (ACIB) formerly Proyecto Epidemiológico Guanacaste, Fundación INCIENSA (FUNIN), San José, Costa Rica.
Carolina PorrasAgencia Costarricense de Investigaciones Biomédicas (ACIB) formerly Proyecto Epidemiológico Guanacaste, Fundación INCIENSA (FUNIN), San José, Costa Rica.
Lisa MirabelloDivision of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, MD, USA.ORCID 0000-0001-8485-0106
John T SchillerCenter for Cancer Research, National Cancer Institute, Bethesda, MD, USA.
Mónica S SierraDivision of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, MD, USA.ORCID 0000-0003-1286-057X
Aimée R KreimerDivision of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, MD, USA.ORCID 0000-0003-2906-3438
Gary M CliffordInternational Agency for Research on Cancer (IARC/WHO) Early Detection, Prevention and Infections Branch, Lyon, France.ORCID 0000-0001-7534-333X
Simon BeddowsVirus Reference Department, Public Health Microbiology Division, UK Health Security Agency, London, UK. simon.beddows@ukhsa.gov.uk.ORCID 0000-0002-6879-6215

Funding

HPV Vaccine TrialZIACP010217 · NCI · DIVISION OF CANCER EPIDEMIOLOGY AND GENETICS · PI KREIMER, AIMEE · 2011 to 2025
$42.3M
Understanding Papillomavirus Virion Proteins and VaccinesZIABC009052 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SCHILLER, JOHN T. · 2009 to 2025
$38.4M
NCI NIH HHS N01 CP011005World Health Organization 001
6 · The paper itself

Abstract

Human Papillomavirus (HPV) type variants have been classified into lineages and sublineages based upon their whole genome sequence. Here we have examined the specificity of antibodies generated following natural infection with lineage variants of oncogenic types (HPV16, 18, 31, 33, 45, 52 and 58) by testing serum samples assembled from existing archives from women residing in Africa, The Americas, Asia or Europe against representative lineage-specific pseudoviruses for each genotype. We have subjected the resulting neutralizing antibody data to antigenic clustering methods and created relational antigenic profiles for each genotype to inform the delineation of lineage-specific serotypes. For most genotypes, there was evidence of differential recognition of lineage-specific antigens and in some cases of a sufficient magnitude to suggest that some lineages should be considered antigenically distinct within their respective genotypes. These data provide compelling evidence for a degree of lineage specificity within the humoral immune response following natural infection with oncogenic HPV.

Indexed as

Papillomavirus InfectionsPapillomavirus VaccinesAntibodies, NeutralizingAntibodies, ViralCapsidCapsid ProteinsFemaleHuman papillomavirus 16HumansPapillomaviridaeAntibodies, NeutralizingAntibodies, ViralCapsid ProteinsPapillomavirus Vaccines

Identifiers

PMID38383518
PMCPMC10881982

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.