Evidence map›Paper›PMID 38381785›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

The early macrophage response to pathogens requires dynamic regulation of the nuclear paraspeckle.

Sikandar Azam, Kaitlyn S Armijo, Chi G Weindel, Morgan J Chapman, Alice Devigne, Shinichi Nakagawa, Tetsuro Hirose, Susan Carpenter, Robert O Watson, Kristin L Patrick

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

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  5. Immiscible proteins compete for RNA binding to order condensate layers.Proceedings of the National Academy of Sciences of the United States of America · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Sikandar AzamDepartment of Microbial Pathogenesis and Immunology, Texas A&M University, School of Medicine, Bryan, TX 77807.ORCID 0009-0008-0717-7155
Kaitlyn S ArmijoDepartment of Microbial Pathogenesis and Immunology, Texas A&M University, School of Medicine, Bryan, TX 77807.ORCID 0000-0003-2301-079X
Chi G WeindelDepartment of Microbial Pathogenesis and Immunology, Texas A&M University, School of Medicine, Bryan, TX 77807.
Morgan J ChapmanDepartment of Microbial Pathogenesis and Immunology, Texas A&M University, School of Medicine, Bryan, TX 77807.ORCID 0000-0003-1777-5227
Alice DevigneDepartment of Molecular, Cell, and Developmental Biology, University of California, Santa Cruz, CA 95064.
Shinichi NakagawaRNA Biology Laboratory, Hokkaido University, Sapporo 060-0812, Japan.
Tetsuro HiroseRNA Biofunction Laboratory, Graduate School of Frontier Biosciences, Osaka University, Osaka 565-0871, Japan.
Susan CarpenterDepartment of Molecular, Cell, and Developmental Biology, University of California, Santa Cruz, CA 95064.ORCID 0000-0002-5600-5404
Robert O WatsonDepartment of Microbial Pathogenesis and Immunology, Texas A&M University, School of Medicine, Bryan, TX 77807.
Kristin L PatrickDepartment of Microbial Pathogenesis and Immunology, Texas A&M University, School of Medicine, Bryan, TX 77807.
University of California, Santa Cruz · USHokkaido University · JPThe University of Osaka · JP

Funding

Pre-mRNA splicing regulation is critical for controlling macrophage activationR35GM133720 · NIGMS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Kristin Leigh Patrick · 2019 to 2026
$3.3M
Mitochondria as crucial regulators of innate immune outcomes during Mycobacterium tuberculosis infectionR01AI155621 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI PATRICK, KRISTIN LEIGH, WATSON, ROBERT OWEN · 2021 to 2025
$2.9M
IMSD at Texas A&M University: Initiative for Maximizing Student Diversity in Biomedical SciencesT32GM135748 · NIGMS · TEXAS A&M UNIVERSITY · PI BRINKMEYER-LANGFORD, CANDICE L., CHIU, WEIHSUEH A · 2020 to 2024
$1.2M
NIAID NIH HHS R01 AI155621NIGMS NIH HHS R35 GM133720NIGMS NIH HHS T32 GM135748
6 · The paper itself

Abstract

To ensure a robust immune response to pathogens without risking immunopathology, the kinetics and amplitude of inflammatory gene expression in macrophages need to be exquisitely well controlled. There is a growing appreciation for stress-responsive membraneless organelles (MLOs) regulating various steps of eukaryotic gene expression in response to extrinsic cues. Here, we implicate the nuclear paraspeckle, a highly ordered biomolecular condensate that nucleates on the

Indexed as

ParaspecklesRNA, Long NoncodingAnimalsHumansMacrophagesMiceRNA, Long Noncodinginnate immunitymembraneless organellesNeat1 lncRNAnuclear RNA exosome

Identifiers

PMID38381785
PMCPMC10907238
OpenAlexW4391992022

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.