Evidence map›Paper›PMID 38381309›Full record

ArticleApplied biochemistry and biotechnology2024

Integrating Network Pharmacology and Experimental Verification to Explore the Pharmacological Mechanisms of Radix Paeoniae Rubra Against Glioma.

Siyu Zhu, Qianxu Jin, Shiyang Zhang, Zihan Song, Shiqi Zhang, Zongmao Zhao

Abstract read
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In one paragraph

Article in Applied biochemistry and biotechnology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Siyu ZhuDepartment of Neurosurgery, The Second Hospital of Hebei Medical University, Shijiazhuang, Hebei, China.
Qianxu JinDepartment of Neurosurgery, The Fourth Hospital of Hebei Medical University, Shijiazhuang, Hebei, China.
Shiyang ZhangDepartment of Neurosurgery, The Second Hospital of Hebei Medical University, Shijiazhuang, Hebei, China.
Zihan SongDepartment of Neurosurgery, The Second Hospital of Hebei Medical University, Shijiazhuang, Hebei, China.
Shiqi ZhangDepartment of Neurosurgery, The Second Hospital of Hebei Medical University, Shijiazhuang, Hebei, China.
Zongmao ZhaoDepartment of Neurosurgery, The Second Hospital of Hebei Medical University, Shijiazhuang, Hebei, China. zzm@hbmu.edu.ORCID http://orcid.org/0009-0006-9982-8669

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glioma has a high mortality and can hardly be completely cured. Radix Paeoniae Rubra (RPR) is a prevalent component in traditional Chinese medicine used for tumor treatments. We explored the mechanism of RPR in treating glioma using network pharmacology and experiments. A network pharmacology approach was used to screen active ingredients, targets of RPR and glioma. We then constructed a herb-active ingredient-target-pathway network and conducted protein-protein interaction (PPI) network analysis, as well as Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis. Molecular docking was also performed. Using CCK-8, colony formation, and xenograft experiments, we evaluated the effect of RPR on glioma. The involved pathway and proteins were identified by Western blot. From public databases, we identified nine active RPR ingredients and 40 overlapping targets among 109 RPR targets and 1360 glioma-associated targets. The PPI analysis revealed ten targets, such as AKT1, TP53, and VEGFA, which were identified as hub genes. The results from GO and KEGG analysis highlighted the involvement of the PI3K/AKT pathway. A herb-active ingredient-target-pathway network was constructed. By docking molecular structures, six suitable conformations have been identified. The RPR extract demonstrated anti-tumor properties by inhibiting glioma cell proliferation in vitro and in vivo, likely achieved by suppressing the phosphorylation of the PI3K/AKT signaling pathway. RPR concurrently downregulated the phosphorylation level of AKT1 and the protein expression level of VEGFA, while upregulating the expression of P53 in the U251 cell line. Utilizing network pharmacology and molecular docking, our study not only predicted the impact of RPR on glioma but also delineated the herb-active ingredient-target-pathway network. Experimentally, we confirmed that RPR may exert its anti-tumor properties by inhibiting the phosphorylation of the PI3K/AKT pathway, including AKT1, and by regulating the expression levels of VEGFA and P53.

Indexed as

Drugs, Chinese HerbalGliomaMolecular Docking SimulationNetwork PharmacologyPaeoniaAnimalsBrain NeoplasmsCell Line, TumorCell ProliferationHumansMiceMice, NudePhosphatidylinositol 3-KinasesProtein Interaction MapsProto-Oncogene Proteins c-aktSignal TransductionDrugs, Chinese HerbalPhosphatidylinositol 3-KinasesProto-Oncogene Proteins c-aktTumor Suppressor Protein p53Vascular Endothelial Growth Factor AExperimental verificationGliomaMolecular dockingNetwork pharmacologyPI3K/AKT signaling pathwayRadix Paeoniae Rubra

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.