Evidence map›Paper›PMID 38379568›Full record

ArticleOpen forum infectious diseases2024

Derivation and Internal Validation of a Mortality Prognostication Machine Learning Model in Ebola Virus Disease Based on Iterative Point-of-Care Biomarkers.

Courtney J Bearnot, Eta N Mbong, Rigo F Muhayangabo, Razia Laghari, Kelsey Butler, Monique Gainey, Shiromi M Perera, Ian C Michelow, Oliver Y Tang, Adam C Levine and 2 more

Abstract read
In one paragraph

Article in Open forum infectious diseases, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

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5 · Who and what money

Authors and funding

12 authors.

Courtney J BearnotDepartment of Emergency Medicine, Alpert Medical School of Brown University, Providence, Rhode Island, USA.ORCID https://orcid.org/0000-0002-5917-2742
Eta N MbongInternational Medical Corps, Goma, Democratic Republic of Congo.
Rigo F MuhayangaboInternational Medical Corps, Goma, Democratic Republic of Congo.
Razia LaghariInternational Medical Corps, Goma, Democratic Republic of Congo.
Kelsey ButlerProgram in Bioinformatics and Integrative Biology, University of Massachusetts Chan Medical School, Worcester, Massachusetts, USA.
Monique GaineyRhode Island Hospital, Providence, Rhode Island, USA.
Shiromi M PereraInternational Medical Corps, Washington, DC, USA.ORCID https://orcid.org/0000-0002-9799-3568
Ian C MichelowDivision of Infectious Diseases and Immunology, Department of Pediatrics, School of Medicine, University of Connecticut, Farmington, Connecticut, USA.ORCID https://orcid.org/0000-0002-8399-480X
Oliver Y TangDepartment of Emergency Medicine, Alpert Medical School of Brown University, Providence, Rhode Island, USA.
Adam C LevineDepartment of Emergency Medicine, Alpert Medical School of Brown University, Providence, Rhode Island, USA.ORCID https://orcid.org/0000-0003-3982-3824
Andrés ColubriProgram in Bioinformatics and Integrative Biology, University of Massachusetts Chan Medical School, Worcester, Massachusetts, USA.
Adam R AluisioDepartment of Emergency Medicine, Alpert Medical School of Brown University, Providence, Rhode Island, USA.ORCID https://orcid.org/0000-0001-7329-7333

Funding

Emerging Infectious Disease Scholars at Brown UniversityR25AI140490 · NIAID · BROWN UNIVERSITY · PI Silvia Shinpei Chiang · 2018 to 2026
$3.0M
NIAID NIH HHS R25 AI140490
6 · The paper itself

Abstract

Background: Although multiple prognostic models exist for Ebola virus disease mortality, few incorporate biomarkers, and none has used longitudinal point-of-care serum testing throughout Ebola treatment center care. Methods: This retrospective study evaluated adult patients with Ebola virus disease during the 10th outbreak in the Democratic Republic of Congo. Ebola virus cycle threshold (Ct; based on reverse transcriptase polymerase chain reaction) and point-of-care serum biomarker values were collected throughout Ebola treatment center care. Four iterative machine learning models were created for prognosis of mortality. The base model used age and admission Ct as predictors. Ct and biomarkers from treatment days 1 and 2, days 3 and 4, and days 5 and 6 associated with mortality were iteratively added to the model to yield mortality risk estimates. Receiver operating characteristic curves for each iteration provided period-specific areas under curve with 95% CIs. Results: Of 310 cases positive for Ebola virus disease, mortality occurred in 46.5%. Biomarkers predictive of mortality were elevated creatinine kinase, aspartate aminotransferase, blood urea nitrogen (BUN), alanine aminotransferase, and potassium; low albumin during days 1 and 2; elevated C-reactive protein, BUN, and potassium during days 3 and 4; and elevated C-reactive protein and BUN during days 5 and 6. The area under curve substantially improved with each iteration: base model, 0.74 (95% CI, .69-.80); days 1 and 2, 0.84 (95% CI, .73-.94); days 3 and 4, 0.94 (95% CI, .88-1.0); and days 5 and 6, 0.96 (95% CI, .90-1.0). Conclusions: This is the first study to utilize iterative point-of-care biomarkers to derive dynamic prognostic mortality models. This novel approach demonstrates that utilizing biomarkers drastically improved prognostication up to 6 days into patient care.

Indexed as

biomarkerEbola virus diseasehumanitarian responsemachine learningpoint-of-care testing

Identifiers

PMID38379568
PMCPMC10878059

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