Evidence map›Paper›PMID 38378804›Full record

ArticleNature ecology & evolution2024

Adaptive tail-length evolution in deer mice is associated with differential Hoxd13 expression in early development.

Evan P Kingsley, Emily R Hager, Jean-Marc Lassance, Kyle M Turner, Olivia S Harringmeyer, Christopher Kirby, Beverly I Neugeboren, Hopi E Hoekstra

Open access · hybridAbstract read
In one paragraph

Article in Nature ecology & evolution, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
13.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. The molecular evolution of vertebrate organs.Nature ecology & evolution · 2026
    Review
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  9. Evolvability in vertebrate segmentation.Seminars in cell & developmental biology · 2025
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. CTCF-dependent insulation ofProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  15. Article
  16. Rapid evolution of body plans.Nature ecology & evolution · 2024
    Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 3 countries.

Evan P KingsleyDepartment of Organismic & Evolutionary Biology, Department of Molecular & Cellular Biology, Museum of Comparative Zoology and Howard Hughes Medical Institute, Harvard University, Cambridge, MA, USA. evan_kingsley@hms.harvard.edu.ORCID http://orcid.org/0000-0002-4351-2300
Emily R HagerDepartment of Organismic & Evolutionary Biology, Department of Molecular & Cellular Biology, Museum of Comparative Zoology and Howard Hughes Medical Institute, Harvard University, Cambridge, MA, USA.ORCID http://orcid.org/0000-0001-7873-2779
Jean-Marc LassanceDepartment of Organismic & Evolutionary Biology, Department of Molecular & Cellular Biology, Museum of Comparative Zoology and Howard Hughes Medical Institute, Harvard University, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-3675-6956
Kyle M TurnerDepartment of Organismic & Evolutionary Biology, Department of Molecular & Cellular Biology, Museum of Comparative Zoology and Howard Hughes Medical Institute, Harvard University, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-7990-1842
Olivia S HarringmeyerDepartment of Organismic & Evolutionary Biology, Department of Molecular & Cellular Biology, Museum of Comparative Zoology and Howard Hughes Medical Institute, Harvard University, Cambridge, MA, USA.ORCID http://orcid.org/0000-0003-4040-2226
Christopher KirbyDepartment of Organismic & Evolutionary Biology, Department of Molecular & Cellular Biology, Museum of Comparative Zoology and Howard Hughes Medical Institute, Harvard University, Cambridge, MA, USA.ORCID http://orcid.org/0000-0001-7292-9044
Beverly I NeugeborenDepartment of Organismic & Evolutionary Biology, Department of Molecular & Cellular Biology, Museum of Comparative Zoology and Howard Hughes Medical Institute, Harvard University, Cambridge, MA, USA.ORCID http://orcid.org/0000-0003-3127-9369
Hopi E HoekstraDepartment of Organismic & Evolutionary Biology, Department of Molecular & Cellular Biology, Museum of Comparative Zoology and Howard Hughes Medical Institute, Harvard University, Cambridge, MA, USA. hoekstra@oeb.harvard.edu.ORCID http://orcid.org/0000-0003-1431-1769
Howard Hughes Medical Institute · USBoston University · US

Funding

Training in Molecular, Cellular, and Chemical BiologyT32GM007598 · NIGMS · HARVARD UNIVERSITY · PI DULAC, CATHERINE · 1985 to 2019
$16.2M
MOLECULAR BIOPHYSICS TRAINING GRANTT32GM008313 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI MURTHY, VENKATESH N · 1989 to 2023
$14.6M
NIGMS NIH HHS T32 GM007598NIGMS NIH HHS T32 GM008313
6 · The paper itself

Abstract

Variation in the size and number of axial segments underlies much of the diversity in animal body plans. Here we investigate the evolutionary, genetic and developmental mechanisms driving tail-length differences between forest and prairie ecotypes of deer mice (Peromyscus maniculatus). We first show that long-tailed forest mice perform better in an arboreal locomotion assay, consistent with tails being important for balance during climbing. We then identify six genomic regions that contribute to differences in tail length, three of which associate with caudal vertebra length and the other three with vertebra number. For all six loci, the forest allele increases tail length, indicative of the cumulative effect of natural selection. Two of the genomic regions associated with variation in vertebra number contain Hox gene clusters. Of those, we find an allele-specific decrease in Hoxd13 expression in the embryonic tail bud of long-tailed forest mice, consistent with its role in axial elongation. Additionally, we find that forest embryos have more presomitic mesoderm than prairie embryos and that this correlates with an increase in the number of neuromesodermal progenitors, which are modulated by Hox13 paralogues. Together, these results suggest a role for Hoxd13 in the development of natural variation in adaptive morphology on a microevolutionary timescale.

Indexed as

Homeodomain ProteinsPeromyscusTranscription FactorsAnimalsForestsSelection, GeneticTailHomeodomain ProteinsTranscription Factors

Identifiers

PMID38378804
PMCPMC11009118
OpenAlexW4391967459

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.