Evidence map›Paper›PMID 38376900›Full record

ArticleeLife2024

Diameter dependence of transport through nuclear pore complex mimics studied using optical nanopores.

Nils Klughammer, Anders Barth, Maurice Dekker, Alessio Fragasso, Patrick R Onck, Cees Dekker

Open access · goldAbstract read
In one paragraph

Article in eLife, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Viral interference of nucleocytoplasmic transport.The Journal of biological chemistry · 2025
    Review
  6. Article
  7. Article
  8. Article
  9. Integrative mapping reveals molecular features underlying the mechanism of nucleocytoplasmic transport.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Phase separation of intrinsically disordered FG-Nups is driven by highly dynamic FG motifs.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Nils Klughammer *Department of Bionanoscience, Kavli Institute of Nanoscience, Delft University of Technology, Delft, Netherlands.ORCID https://orcid.org/0000-0002-8792-2459
Anders Barth *Department of Bionanoscience, Kavli Institute of Nanoscience, Delft University of Technology, Delft, Netherlands.ORCID https://orcid.org/0000-0003-3671-3072
Maurice DekkerZernike Institute for Advanced Materials, University of Groningen, Groningen, Netherlands.ORCID https://orcid.org/0000-0001-7096-8576
Alessio FragassoDepartment of Bionanoscience, Kavli Institute of Nanoscience, Delft University of Technology, Delft, Netherlands.
Patrick R OnckZernike Institute for Advanced Materials, University of Groningen, Groningen, Netherlands.ORCID https://orcid.org/0000-0001-5632-9727
Cees DekkerDepartment of Bionanoscience, Kavli Institute of Nanoscience, Delft University of Technology, Delft, Netherlands.ORCID https://orcid.org/0000-0001-6273-071X
University of Groningen · NL

Funding

European Research Council 883684
6 · The paper itself

Abstract

The nuclear pore complex (NPC) regulates the selective transport of large biomolecules through the nuclear envelope. As a model system for nuclear transport, we construct NPC mimics by functionalizing the pore walls of freestanding palladium zero-mode waveguides with the FG-nucleoporin Nsp1. This approach enables the measurement of single-molecule translocations through individual pores using optical detection. We probe the selectivity of Nsp1-coated pores by quantitatively comparing the translocation rates of the nuclear transport receptor Kap95 to the inert probe BSA over a wide range of pore sizes from 35 nm to 160 nm. Pores below 55 ± 5 nm show significant selectivity that gradually decreases for larger pores. This finding is corroborated by coarse-grained molecular dynamics simulations of the Nsp1 mesh within the pore, which suggest that leakage of BSA occurs by diffusion through transient openings within the dynamic mesh. Furthermore, we experimentally observe a modulation of the BSA permeation when varying the concentration of Kap95. The results demonstrate the potential of single-molecule fluorescence measurements on biomimetic NPCs to elucidate the principles of nuclear transport.

Indexed as

NanoporesNuclear PoreBiomimeticsDiffusionHumansNuclear EnvelopeTranslocation, Geneticbiomimeticsintrinsically disordered proteinsnonenuclear pore complexnucleocytoplasmic transportphysics of living systemssingle-molecule fluorescencesolid-state nanopores

Identifiers

PMID38376900
PMCPMC10942607
OpenAlexW4381334206

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.