Evidence map›Paper›PMID 38372181›Full record

ArticleMolecular microbiology2024

Tetraether archaeal lipids promote long-term survival in extreme conditions.

Geraldy Lie Stefanus Liman, Andy A Garcia, Kristin A Fluke, Hayden R Anderson, Sarah C Davidson, Paula V Welander, Thomas J Santangelo

Open access · hybridAbstract read
In one paragraph

Article in Molecular microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.3field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Mechanistic insight into radicalNatural product reports · 2026
    Review
  3. Review
  4. Cyclization of archaeal membrane lipids impacts membrane protein activity and archaellum formation.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Article
  6. Review
  7. Bilayer-Forming Lipids Enhance Archaeal Monolayer Membrane Stability.International journal of molecular sciences · 2025
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Geraldy Lie Stefanus LimanDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, Colorado, USA.ORCID 0009-0001-4053-6008
Andy A GarciaDepartment of Earth System Science, Stanford University, Stanford, California, USA.ORCID 0000-0001-7515-5646
Kristin A FlukeCell and Molecular Biology Graduate Program, Colorado State University, Fort Collins, Colorado, USA.ORCID 0000-0002-3398-3184
Hayden R AndersonDepartment of Chemistry, Stanford University, Stanford, California, USA.
Sarah C DavidsonDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, Colorado, USA.
Paula V WelanderDepartment of Earth System Science, Stanford University, Stanford, California, USA.ORCID 0000-0002-9502-6902
Thomas J SantangeloDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, Colorado, USA.ORCID 0000-0003-4559-3244
Colorado State University · USStanford University · US

Funding

Predoctoral Training in Quantitative Cell & Molecular BiologyT32GM132057 · NIGMS · COLORADO STATE UNIVERSITY · PI Karen Marie Dobos, Brian Munsky · 2019 to 2026
$2.9M
Mechanisms of Archaeal Transcription Termination - Administrative SupplementR01GM100329 · NIGMS · OHIO STATE UNIVERSITY · PI SANTANGELO, THOMAS JAMES · 2012 to 2021
$2.5M
Regulation of Archaeal TranscriptionR35GM143963 · NIGMS · COLORADO STATE UNIVERSITY · PI Thomas James Santangelo · 2022 to 2026
$1.8M
NASA 80NSSC20K0613National Science Foundation 2016857National Science Foundation 2022065NIGMS NIH HHS GM100329NIGMS NIH HHS GM143963NIGMS NIH HHS R01 GM100329NIGMS NIH HHS R35 GM143963NIGMS NIH HHS T32 GM132057Simons Foundation 735931U.S. Department of Energy DE-SC0014597
6 · The paper itself

Abstract

The sole unifying feature of the incredibly diverse Archaea is their isoprenoid-based ether-linked lipid membranes. Unique lipid membrane composition, including an abundance of membrane-spanning tetraether lipids, impart resistance to extreme conditions. Many questions remain, however, regarding the synthesis and modification of tetraether lipids and how dynamic changes to archaeal lipid membrane composition support hyperthermophily. Tetraether membranes, termed glycerol dibiphytanyl glycerol tetraethers (GDGTs), are generated by tetraether synthase (Tes) by joining the tails of two bilayer lipids known as archaeol. GDGTs are often further specialized through the addition of cyclopentane rings by GDGT ring synthase (Grs). A positive correlation between relative GDGT abundance and entry into stationary phase growth has been observed, but the physiological impact of inhibiting GDGT synthesis has not previously been reported. Here, we demonstrate that the model hyperthermophile Thermococcus kodakarensis remains viable when Tes (TK2145) or Grs (TK0167) are deleted, permitting phenotypic and lipid analyses at different temperatures. The absence of cyclopentane rings in GDGTs does not impact growth in T. kodakarensis, but an overabundance of rings due to ectopic Grs expression is highly fitness negative at supra-optimal temperatures. In contrast, deletion of Tes resulted in the loss of all GDGTs, cyclization of archaeol, and loss of viability upon transition to the stationary phase in this model archaea. These results demonstrate the critical roles of highly specialized, dynamic, isoprenoid-based lipid membranes for archaeal survival at high temperatures.

Indexed as

Membrane LipidsThermococcusArchaeaArchaeal ProteinsGlyceryl EthersLipidsArchaeal ProteinsGlyceryl EthersLipidsMembrane LipidsarchaeaarchaeolGDGTtetraether lipidstetraether synthasethermophily

Identifiers

PMID38372181
PMCPMC11096074
OpenAlexW4391927602

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.