Evidence map›Paper›PMID 38372062›Full record

ArticleRNA biology2024

Mature microRNA-binding protein QKI promotes microRNA-mediated gene silencing.

Kyung-Won Min, Myung Hyun Jo, Minseok Song, Ji Won Lee, Min Ji Shim, Kyungmin Kim, Hyun Bong Park, Shinwon Ha, Hyejin Mun, Ahsan Polash and 8 more

Open access · goldAbstract read
In one paragraph

Article in RNA biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Detection of MicroRNAs Released from Argonautes.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Exosome miRNA sorting controlled by RNA-binding protein-motif interactions.Extracellular vesicles and circulating nucleic acids · 2025
    Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 6 institutions in 2 countries.

Kyung-Won MinDepartment of Biochemistry and Molecular Biology, Medical University of South Carolina, Charleston, SC, USA.ORCID 0000-0002-8718-3588
Myung Hyun JoDepartment of Physics & Astronomy, Seoul National University, Seoul, Republic of Korea.
Minseok SongDepartment of Physics & Astronomy, Seoul National University, Seoul, Republic of Korea.
Ji Won LeeDepartment of Biology, Gangneung-Wonju National University, Gangneung, Republic of Korea.
Min Ji ShimDepartment of Biology, Gangneung-Wonju National University, Gangneung, Republic of Korea.
Kyungmin KimDepartment of Biology, Gangneung-Wonju National University, Gangneung, Republic of Korea.
Hyun Bong ParkDepartment of Biology, Gangneung-Wonju National University, Gangneung, Republic of Korea.
Shinwon HaNeuroregeneration and Stem Cell Programs, Institute for Cell Engineering, Johns Hopkins University School of Medicine, Baltimore, USA.
Hyejin MunDepartment of Biochemistry and Molecular Biology, Medical University of South Carolina, Charleston, SC, USA.
Ahsan PolashLaboratory of Muscle Stem Cells and Gene Regulation, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, USA.
Markus HafnerLaboratory of Muscle Stem Cells and Gene Regulation, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, USA.
Jung-Hyun ChoDepartment of Biochemistry and Molecular Biology, Medical University of South Carolina, Charleston, SC, USA.
Dongsan KimNeuroregeneration and Stem Cell Programs, Institute for Cell Engineering, Johns Hopkins University School of Medicine, Baltimore, USA.
Ji-Hoon JeongDepartment of Oncology Science, University of Oklahoma, Oklahoma City, USA.
Seungbeom KoDepartment of Biochemistry and Molecular Biology, Medical University of South Carolina, Charleston, SC, USA.
Sungchul HohngDepartment of Physics & Astronomy, Seoul National University, Seoul, Republic of Korea.
Sung-Ung KangNeuroregeneration and Stem Cell Programs, Institute for Cell Engineering, Johns Hopkins University School of Medicine, Baltimore, USA.
Je-Hyun YoonDepartment of Biochemistry and Molecular Biology, Medical University of South Carolina, Charleston, SC, USA.
Gangneung–Wonju National University · KRMedical University of South Carolina · USJohns Hopkins University · USSeoul National University · KRNational Institutes of Health · USUlsan College · KR

Funding

Dissecting the role of shuttling mRNA binding proteins in nucleocytoplasmic RNA transportZIAAR041201 · NIAMS · NATIONAL INSTITUTE OF ARTHRITIS AND MUSCULOSKELETAL AND SKIN DISEASES · PI HAFNER, MARKUS · 2014 to 2025
$5.9M
Region-Specific Vulnerability of the Lewy Body Dementia's BrainR01NS123456 · NINDS · JOHNS HOPKINS UNIVERSITY · PI KAM, TAE-IN, KANG, SUNG UNG · 2021 to 2025
$3.6M
Intestinal exosomes in alcohol-induces liver injuryR01AA027532 · NIAAA · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI YOON, JE-HYUN · 2019 to 2023
$1.7M
NIAAA NIH HHS R01 AA027532NINDS NIH HHS R01 NS123456
6 · The paper itself

Abstract

Although Argonaute (AGO) proteins have been the focus of microRNA (miRNA) studies, we observed AGO-free mature miRNAs directly interacting with RNA-binding proteins, implying the sophisticated nature of fine-tuning gene regulation by miRNAs. To investigate microRNA-binding proteins (miRBPs) globally, we analyzed PAR-CLIP data sets to identify RBP quaking (QKI) as a novel miRBP for let-7b. Potential existence of AGO-free miRNAs were further verified by measuring miRNA levels in genetically engineered AGO-depleted human and mouse cells. We have shown that QKI regulates miRNA-mediated gene silencing at multiple steps, and collectively serves as an auxiliary factor empowering AGO2/let-7b-mediated gene silencing. Depletion of QKI decreases interaction of AGO2 with let-7b and target mRNA, consequently controlling target mRNA decay. This finding indicates that QKI is a complementary factor in miRNA-mediated mRNA decay. QKI, however, also suppresses the dissociation of let-7b from AGO2, and slows the assembly of AGO2/miRNA/target mRNA complexes at the single-molecule level. We also revealed that QKI overexpression suppresses cMYC expression at post-transcriptional level, and decreases proliferation and migration of HeLa cells, demonstrating that QKI is a tumour suppressor gene by in part augmenting let-7b activity. Our data show that QKI is a new type of RBP implicated in the versatile regulation of miRNA-mediated gene silencing.

Indexed as

MicroRNAsAnimalsArgonaute ProteinsGene SilencingHeLa CellsHumansMiceRNA-Binding ProteinsRNA, MessengerArgonaute ProteinsMicroRNAsQKI protein, humanRNA-Binding ProteinsRNA, MessengerAGO2let-7bQKIRNA-binding proteinTumour suppressor gene

Identifiers

PMID38372062
PMCPMC10878027
OpenAlexW4391945382

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.