Evidence map›Paper›PMID 38371658›Full record

ArticleRoyal Society open science2024

Possible monitoring of mesophotic scleractinian corals using an underwater mini-ROV to sample coral eDNA.

Koki Nishitsuji, Shinichiro Nagahama, Haruhi Narisoko, Kazuo Shimada, Nobuhiro Okada, Yuki Shimizu, Noriyuki Satoh

Abstract read
In one paragraph

Article in Royal Society open science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Koki NishitsujiMarine Genomics Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa 904-0495, Japan.ORCID https://orcid.org/0000-0002-4015-7139
Shinichiro NagahamaNTT Communications, Kyushu Office, Naha, Okinawa 900-0025, Japan.
Haruhi NarisokoMarine Genomics Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa 904-0495, Japan.ORCID https://orcid.org/0000-0003-1844-8201
Kazuo ShimadaDocomo Business Solutions, Inc., Kyushu Office, Naha, Okinawa 900-0025, Japan.
Nobuhiro OkadaDivision of Solution Service, NTT DOCOMO, INC., Minato-ku, Tokyo 107-0052, Japan.
Yuki ShimizuDivision of Solution Service, NTT DOCOMO, INC., Minato-ku, Tokyo 107-0052, Japan.
Noriyuki SatohMarine Genomics Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa 904-0495, Japan.ORCID 0000-0002-4480-3572

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mesophotic coral ecosystems (MCEs) are light-dependent tropical or subtropical communities occurring at depths of 30-150 m. Broader surveys of MCEs are needed to better understand stony corals, the keystone species of coral-reef ecosystems. While MCEs have been studied by professional SCUBA divers and with deep-sea robots, comprehensive surveys of MCEs are required. An eDNA metabarcoding method has recently been used to survey scleractinian corals in shallow reefs. We tested whether MCEs might be more comprehensively surveyed by collecting seawater samples using an underwater mini-remote operated vehicle (mini-ROV). Seawater was collected 1-2 m above reef tops at depths of 20-80 m at 24 sites in six locations around the Zamami Islands (Okinawa, Japan). Water samples were then subjected to coral-specific eDNA amplification. Metabarcoding analyses of amplicons showed that except for one site, coral-specific eDNA from approximately 0.5 l seawater samples was sufficient to identify genera. The proportion of

Indexed as

a possible surveycoral-specific eDNAgenera-level detectionmesophotic scleractinian coralsunderwater mini-ROVs

Identifiers

PMID38371658
PMCPMC10870239

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.