Evidence map›Paper›PMID 38371635›Full record

ArticleHorticulture research2024

Strawberry soluble solids QTL with inverse effects on yield.

Zhen Fan, Sujeet Verma, Hana Lee, Yoon Jeong Jang, Yu Wang, Seonghee Lee, Vance M Whitaker

Open access · goldAbstract read
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Article in Horticulture research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
6.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Zhen FanIFAS Gulf Coast Research and Education Center, Horticultural Sciences Department, University of Florida, Wimauma, Florida 33597, USA.ORCID https://orcid.org/0000-0002-8965-7898
Sujeet VermaIFAS Gulf Coast Research and Education Center, Horticultural Sciences Department, University of Florida, Wimauma, Florida 33597, USA.
Hana LeeDepartment of Food Science and Human Nutrition, IFAS Citrus Research and Education Center, University of Florida, Lake Alfred, Florida 33850, USA.
Yoon Jeong JangIFAS Gulf Coast Research and Education Center, Horticultural Sciences Department, University of Florida, Wimauma, Florida 33597, USA.
Yu WangDepartment of Food Science and Human Nutrition, IFAS Citrus Research and Education Center, University of Florida, Lake Alfred, Florida 33850, USA.
Seonghee LeeIFAS Gulf Coast Research and Education Center, Horticultural Sciences Department, University of Florida, Wimauma, Florida 33597, USA.
Vance M WhitakerIFAS Gulf Coast Research and Education Center, Horticultural Sciences Department, University of Florida, Wimauma, Florida 33597, USA.ORCID https://orcid.org/0000-0002-2172-3019
University of Florida · USFlorida Department of Citrus · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sugars are the main drivers of strawberry sweetness, and understanding their genetic control is of critical importance for breeding. Large-scale genome-wide association studies were performed in two populations totaling 3399 individuals evaluated for soluble solids content (SSC) and fruit yield. Two stable quantitative trait loci (QTL) on chromosome 3B and 6A for SSC were identified. Favorable haplotypes at both QTL for SSC decreased yield, though optimal allelic combinations were identified with reduced impacts on yield. Metabolites in the starch and sucrose metabolism pathway were characterized and quantified for 23 contrasting genotypes in leaves, white fruit, and red fruit. Variations in sucrose concentrations/efflux indicated genetic variation underlying sucrose accumulation and transportation during fruit ripening. Integration of genome-wide association studies and expression quantitative locus mapping identified starch synthase 4 (FxaC_10g00830) and sugar transporter 2-like candidate genes (FxaC_21g51570) within the respective QTL intervals. These results will enable immediate applications in genomics-assisted breeding for flavor and further study of candidate genes underlying genetic variation of sugar accumulation in strawberry fruit.

Identifiers

PMID38371635
PMCPMC10873791
OpenAlexW4390047945

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.