Evidence map›Paper›PMID 38371064›Full record

ArticleCureus2024

Genomics and Drug Discovery Strategies: The Role of Natural Compounds and Its Receptor in Alzheimer's Disease.

Shweta Mishra, Tarique Aziz, Annie J Toppo, Daksh Kumar, Mona P Tirkey, Priyangulta Beck, Nawed Anjum, Dipanjali Sharma, Md Mahfooz Khan, Shristi Kumari and 2 more

Open access · diamondAbstract read
In one paragraph

Article in Cureus, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Shweta MishraGenetics, Digianalix, Ranchi, IND.
Tarique AzizBiochemistry, Rajendra Institute of Medical Sciences, Ranchi, IND.
Annie J ToppoGenetics, Digianalix, Ranchi, IND.
Daksh KumarGenetics, Digianalix, Ranchi, IND.
Mona P TirkeyGenetics, Digianalix, Ranchi, IND.
Priyangulta BeckGenetics, Digianalix, Ranchi, IND.
Nawed AnjumBiochemistry, Rajendra Institute of Medical Sciences, Ranchi, IND.
Dipanjali SharmaGenetics, Digianalix, Ranchi, IND.
Md Mahfooz KhanGenetics, Digianalix, Ranchi, IND.
Shristi KumariBiotechnology, Marwari College, Ranchi, IND.
Pinki R SahuBiotechnology, Marwari College, Ranchi, IND.
Mukesh NitinGenetics, Digianalix, Ranchi, IND.
Ranchi University · INRajendra Institute of Medical Sciences · INDepartment of Biotechnology · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Alzheimer's Disease (AD) is a special class of neurodegenerative diseases demarcated as a progressive disorder affecting especially older adults globally. The AD-infected brain shows declination in cognitive functions, memory loss, and other exhausting symptoms. In this study, we focused on using advanced bioinformatics and next-generation sequencing to explore essential clusters of genes from various diversified Alzheimer's, Parkinson and Frontotemporal Dementia diseased cases. The significant differential expression analysis of genes (p-value ≤ 0.05, log fold change ≤ 0.05) was carried out, followed by meta-analysis, which resulted in the identification of 20 conserved genes across variable case studies. Out of 20 conserved genes, CASP8 and PTPN11 were observed to show essential regulatory mechanisms in AD metabolic pathways and proceeded further for docking analysis. Moreover, the natural compounds were screened for ligand library preparation based on extensive scientific literature and (ADMET (Absorption, Distribution, Metabolism, Excretion, and Toxicity)) property check. Molecular docking was carried out with screened ligands and target receptors, resulting in the identification of Rosmarinic acid (RA) with CASP8 having docked score (∆G = -8.0 kcal/mol); Donepezil (FDA drug) dock score (∆G = -7.3 kcal/mol) (control). PTPN11 receptor with Carnosol ligand resulted in docking score (∆G = -9.1 kcal/mol) w.r.t Tacrine (FDA drug) docked score (∆G = -8.0 kcal/mol) followed by MD simulation. This research will aid in the identification of potential natural compounds that future researchers can use for further validation as a potential candidate drug in combating various neurodegenerative diseases highlighting AD.

Indexed as

computational approachdockingmd simulationneurodegenerative diseasesnext generation sequencing

Identifiers

PMID38371064
PMCPMC10870247
OpenAlexW4390948338

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.