Evidence map›Paper›PMID 38370728›Full record

ArticlebioRxiv : the preprint server for biology2024

Zebrafish models of candidate human epilepsy-associated genes provide evidence of hyperexcitability.

Christopher Mark LaCoursiere, Jeremy F P Ullmann, Hyun Yong Koh, Laura Turner, Cristina M Baker, Barbara Robens, Wanqing Shao, Alexander Rotenberg, Christopher M McGraw, Annapurna Poduri

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 5 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Christopher Mark LaCoursiereF.M. Kirby Neurobiology Center, Department of Neurology, Boston Children's Hospital, Boston, MA, USA.
Jeremy F P UllmannF.M. Kirby Neurobiology Center, Department of Neurology, Boston Children's Hospital, Boston, MA, USA.ORCID 0000-0002-3073-9151
Hyun Yong KohF.M. Kirby Neurobiology Center, Department of Neurology, Boston Children's Hospital, Boston, MA, USA.
Laura TurnerF.M. Kirby Neurobiology Center, Department of Neurology, Boston Children's Hospital, Boston, MA, USA.
Cristina M BakerF.M. Kirby Neurobiology Center, Department of Neurology, Boston Children's Hospital, Boston, MA, USA.
Barbara RobensF.M. Kirby Neurobiology Center, Department of Neurology, Boston Children's Hospital, Boston, MA, USA.ORCID 0000-0001-9073-3088
Wanqing ShaoResearch Computing, Department of Information Technology, Boston Children's Hospital, Boston, MA, USA.ORCID 0000-0003-4234-2095
Alexander RotenbergF.M. Kirby Neurobiology Center, Department of Neurology, Boston Children's Hospital, Boston, MA, USA.ORCID 0000-0002-6495-5928
Christopher M McGrawF.M. Kirby Neurobiology Center, Department of Neurology, Boston Children's Hospital, Boston, MA, USA.ORCID 0000-0002-5460-4550
Annapurna PoduriF.M. Kirby Neurobiology Center, Department of Neurology, Boston Children's Hospital, Boston, MA, USA.ORCID 0000-0002-7350-5136
Boston Children's Hospital · USBroad Institute · US

Funding

Genetic Analysis and Manipulation Core (GAEC)P50HD105351 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI Hisashi Umemori · 2021 to 2026
$9.4M
Developing a Zebrafish Model of Slc6a1/GAT1 Hypofunction and an In Vitro Assay to Identify Novel TreatmentsK08NS118107 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI MCGRAW, CHRISTOPHER · 2020 to 2024
$1.1M
NICHD NIH HHS P50 HD105351NINDS NIH HHS K08 NS118107
6 · The paper itself

Abstract

Hundreds of novel candidate human epilepsy-associated genes have been identified thanks to advancements in next-generation sequencing and large genome-wide association studies, but establishing genetic etiology requires functional validation. We generated a list of >2200 candidate epilepsy-associated genes, of which 81 were determined suitable for the generation of loss-of-function zebrafish models via CRISPR/Cas9 gene editing. Of those 81 crispants, 48 were successfully established as stable mutant lines and assessed for seizure-like swim patterns in a primary F

Identifiers

PMID38370728
PMCPMC10871320
OpenAlexW4391691949

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.