Evidence map›Paper›PMID 38370661›Full record

ArticlebioRxiv : the preprint server for biology2024

Modified histone peptides uniquely tune the material properties of HP1α condensates.

Priyasha Deshpande, Emily Prentice, Alfredo Vidal Ceballos, Patrizia Casaccia, Shana Elbaum-Garfinkle

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Priyasha DeshpandePh.D. Program in Biochemistry, Graduate Center of the City University of New York, NY.
Emily PrenticePh.D. Program in Biology, Graduate Center of the City University of New York, NY.
Alfredo Vidal CeballosStructural Biology Initiative, Advanced Science Research Center, CUNY, New York, NY.
Patrizia CasacciaPh.D. Program in Biochemistry, Graduate Center of the City University of New York, NY.
Shana Elbaum-GarfinklePh.D. Program in Biochemistry, Graduate Center of the City University of New York, NY.
The Graduate Center, CUNY · US

Funding

Environmental Biosensors in the Oligodendrocyte LineageR35NS111604 · NINDS · ADVANCED SCIENCE RESEARCH CENTER · PI Patrizia Casaccia · 2019 to 2026
$9.1M
From Physiological Liquids to Pathological Gels: Regulation of Protein Phase Separation in Neurodegenerative DiseaseR00NS096217 · NINDS · ADVANCED SCIENCE RESEARCH CENTER · PI ELBAUM, SHANA · 2017 to 2019
$747k
From Physiological Liquids to Pathological Gels: Regulation of Protein Phase Separation in Neurodegenerative DiseaseK99NS096217 · NINDS · PRINCETON UNIVERSITY · PI ELBAUM, SHANA · 2016 to 2017
$119k
NINDS NIH HHS K99 NS096217NINDS NIH HHS R00 NS096217NINDS NIH HHS R35 NS111604
6 · The paper itself

Abstract

Biomolecular condensates have emerged as a powerful new paradigm in cell biology with broad implications to human health and disease, particularly in the nucleus where phase separation is thought to underly elements of chromatin organization and regulation. Specifically, it has been recently reported that phase separation of heterochromatin protein 1alpha (HP1α) with DNA contributes to the formation of condensed chromatin states. HP1α localization to heterochromatic regions is mediated by its binding to specific repressive marks on the tail of histone H3, such as trimethylated lysine 9 on histone H3 (H3K9me3). However, whether epigenetic marks play an active role in modulating the material properties of HP1α and dictating emergent functions of its condensates, remains only partially understood. Here, we leverage a reductionist system, comprised of modified and unmodified histone H3 peptides, HP1α and DNA to examine the contribution of specific epigenetic marks to phase behavior of HP1α. We show that the presence of histone peptides bearing the repressive H3K9me3 is compatible with HP1α condensates, while peptides containing unmodified residues or bearing the transcriptional activation mark H3K4me3 are incompatible with HP1α phase separation. In addition, inspired by the decreased ratio of nuclear H3K9me3 to HP1α detected in cells exposed to uniaxial strain, using fluorescence microscopy and rheological approaches we demonstrate that H3K9me3 histone peptides modulate the dynamics and network properties of HP1α condensates in a concentration dependent manner. These data suggest that HP1α-DNA condensates are viscoelastic materials, whose properties may provide an explanation for the dynamic behavior of heterochromatin in cells in response to mechanostimulation.

Identifiers

PMID38370661
PMCPMC10871333
OpenAlexW4391694792

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.