Evidence map›Paper›PMID 38369539›Full record

ArticleBMC research notes2024

Genotype data for 60 SNP genetic markers associated with eye, hair, skin color, ABO blood group, sex, core Y-chromosome haplogroups in Kazakh population.

Alizhan Bukayev, Baglan Aidarov, Denis Fesenko, Viktoriya Saidamarova, Ivan Ivanovsky, Elina Maltseva, Dinara Naizabayeva, Ayagoz Bukayeva, Bekzhan Faizov, Vladimir Pylev and 4 more

Open access · goldAbstract read
In one paragraph

Article in BMC research notes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.0field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Alizhan BukayevNational Center for Biotechnology, Astana, 010000, Republic of Kazakhstan.
Baglan AidarovNational Center for Biotechnology, Astana, 010000, Republic of Kazakhstan.
Denis FesenkoEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, 119991, Russia.
Viktoriya SaidamarovaKaraganda Academy of the Ministry of Internal Affairs of the Republic of Kazakhstan Named After Barimbek Beisenov, Karaganda, 100000, Republic of Kazakhstan.
Ivan IvanovskyDNA Research Center, LLC, Khimki, 141402, Russia.
Elina MaltsevaAlmaty Branch of the National Center for Biotechnology, Almaty, 050054, Kazakhstan.
Dinara NaizabayevaAlmaty Branch of the National Center for Biotechnology, Almaty, 050054, Kazakhstan.
Ayagoz BukayevaNational Center for Biotechnology, Astana, 010000, Republic of Kazakhstan.
Bekzhan FaizovNational Center for Biotechnology, Astana, 010000, Republic of Kazakhstan.
Vladimir PylevBochkov Research Centre of Medical Genetics, Moscow, 115522, Russia.
Akynkali DarmenovKaraganda Academy of the Ministry of Internal Affairs of the Republic of Kazakhstan Named After Barimbek Beisenov, Karaganda, 100000, Republic of Kazakhstan.
Yuriy SkibaAlmaty Branch of the National Center for Biotechnology, Almaty, 050054, Kazakhstan.
Elena BalanovskaBochkov Research Centre of Medical Genetics, Moscow, 115522, Russia.
Maxat ZhabaginNational Center for Biotechnology, Astana, 010000, Republic of Kazakhstan. mzhabagin@gmail.com.
National Center for Biotechnology · KZKaragandy State University · KZResearch Centre for Medical Genetics · RUEngelhardt Institute of Molecular Biology · RU

Funding

Ministry of Science and Higher Education of the Republic of Kazakhstan AP09058276
6 · The paper itself

Abstract

objectivesThe collection of genotype data was conducted as an essential part of a pivotal research project with the goal of examining the genetic variability of skin, hair, and iris color among the Kazakh population. The data has practical application in the field of forensic DNA phenotyping (FDA). Due to the limited size of forensic databases from Central Asia (Kazakhstan), it is practically impossible to obtain an individual identification result based on forensic profiling of short tandem repeats (STRs). However, the pervasive use of the FDA necessitates validation of the currently employed set of genetic markers in a variety of global populations. No such data existed for the Kazakhs. The Phenotype Expert kit (DNA Research Center, LLC, Russia) was used for the first time in this study to collect data. DATA DESCRIPTION: The present study provides genotype data for a total of 60 SNP genetic markers, which were analyzed in a sample of 515 ethnic Kazakhs. The dataset comprises a total of 41 single nucleotide polymorphisms (SNPs) obtained from the HIrisPlex-S panel. Additionally, there are 4 SNPs specifically related to the AB0 gene, 1 marker associated with the AMELX/Y genes, and 14 SNPs corresponding to the primary haplogroups of the Y chromosome. The aforementioned data could prove valuable to researchers with an interest in investigating genetic variability and making predictions about phenotype based on eye color, hair color, skin color, AB0 blood group, gender, and biogeographic origin within the male lineage.

Indexed as

ABO Blood-Group SystemCentral Asian PeopleChromosomes, Human, YHaplotypesPigmentationDNAGenetic MarkersGenetics, PopulationGenetic VariationGenotypeHairHumansMalePolymorphism, Single NucleotideSkin PigmentationABO Blood-Group SystemDNAGenetic MarkersAB0 blood groupEye colorForensic DNA Phenotyping (FDA)Hair colorKazakh populationMicroarraySexSkin colorSNP GenotypingY-chromosome haplogroup

Identifiers

PMID38369539
PMCPMC10874529
OpenAlexW4391917628

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