Evidence map›Paper›PMID 38366771›Full record

ArticleNucleic acids research2024

Cryo-EM structure of SRP68/72 reveals an extended dimerization domain with RNA-binding activity.

Yichen Zhong, Junjie Feng, Adrian F Koh, Abhay Kotecha, Basil J Greber, Sandro F Ataide

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Yichen ZhongSchool of Life and Environmental Sciences, The University of Sydney, NSW 2006, Australia.
Junjie FengDivision of Structural Biology, The Institute of Cancer Research, London SW3 6JB, UK.
Adrian F KohMaterials and Structural Analysis Division, Thermo Fisher Scientific, Achtseweg Noord 5, 5651 Eindhoven, The Netherlands.
Abhay KotechaMaterials and Structural Analysis Division, Thermo Fisher Scientific, Achtseweg Noord 5, 5651 Eindhoven, The Netherlands.
Basil J GreberDivision of Structural Biology, The Institute of Cancer Research, London SW3 6JB, UK.
Sandro F AtaideSchool of Life and Environmental Sciences, The University of Sydney, NSW 2006, Australia.ORCID 0000-0003-1807-5708
Institute of Cancer Research · GBThermo Fisher Scientific (Netherlands) · NLThe University of Sydney · AU

Funding

ICR FellowshipICR postdoctoral fellowshipMedical Research Council MR/V009354/1MRC Career Development Award MR/V009354/1University of Sydney
6 · The paper itself

Abstract

The signal recognition particle (SRP) is a critical component in protein sorting pathways in all domains of life. Human SRP contains six proteins bound to the 7S RNA and their structures and functions have been mostly elucidated. The SRP68/72 dimer is the largest SRP component and is essential for SRP function. Although the structures of the SRP68/72 RNA binding and dimerization domains have been previously reported, the structure and function of large portions of the SRP68/72 dimer remain unknown. Here, we analyse full-length SRP68/72 using cryo-EM and report that SRP68/72 depend on each other for stability and form an extended dimerization domain. This newly observed dimerization domain is both a protein- and RNA-binding domain. Comparative analysis with current structural models suggests that this dimerization domain undergoes dramatic translocation upon SRP docking onto SRP receptor and eventually comes close to the Alu domain. We propose that the SRP68/72 dimerization domain functions by binding and detaching the Alu domain and SRP9/14 from the ribosomal surface, thus releasing elongation arrest upon docking onto the ER membrane.

Indexed as

Cryoelectron MicroscopyModels, MolecularProtein MultimerizationSignal Recognition ParticleBinding SitesHumansProtein BindingProtein DomainsRNARNA-Binding ProteinsRNARNA-Binding ProteinsSignal Recognition ParticleSRP68 protein, humanSRP72 protein, human

Identifiers

PMID38366771
PMCPMC11109942
OpenAlexW4391897572

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.