Evidence map›Paper›PMID 38366388›Full record

ArticleTree physiology2024

Comparative transcriptomics of the chilling stress response in two Asian mangrove species, Bruguiera gymnorhiza and Rhizophora apiculata.

Aidan W Short, John Sunoj V Sebastian, Jie Huang, Guannan Wang, Maheshi Dassanayake, Patrick M Finnegan, John D Parker, Kun-Fang Cao, Alison K S Wee

Open access · bronzeAbstract read
In one paragraph

Article in Tree physiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.9field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 4 countries.

Aidan W ShortGuangxi Key Laboratory of Forest Ecology and Conservation, College of Forestry, Guangxi University, Daxuedonglu 100, Nanning 530004, China.
John Sunoj V SebastianGuangxi Key Laboratory of Forest Ecology and Conservation, College of Forestry, Guangxi University, Daxuedonglu 100, Nanning 530004, China.
Jie HuangGuangxi Key Laboratory of Forest Ecology and Conservation, College of Forestry, Guangxi University, Daxuedonglu 100, Nanning 530004, China.
Guannan WangDepartment of Biological Sciences, Louisiana State University (LSU), 202 Life Science Bldg, Baton Rouge, LA 70803, USA.
Maheshi DassanayakeDepartment of Biological Sciences, Louisiana State University (LSU), 202 Life Science Bldg, Baton Rouge, LA 70803, USA.
Patrick M FinneganSchool of Biological Sciences, University of Western Australia, 35 Stirling Highway, Perth, WA 6009, Australia.
John D ParkerSmithsonian Environmental Research Center, Smithsonian Institution, 647 Contees Wharf Road, Edgewater, MD 21037, USA.
Kun-Fang CaoGuangxi Key Laboratory of Forest Ecology and Conservation, College of Forestry, Guangxi University, Daxuedonglu 100, Nanning 530004, China.
Alison K S WeeGuangxi Key Laboratory of Forest Ecology and Conservation, College of Forestry, Guangxi University, Daxuedonglu 100, Nanning 530004, China.
Guangxi University · CNLouisiana State University · USSmithsonian Institution · USThe University of Western Australia · AU

Funding

Chinese Scholarship Council under the Chinese Government Scholarship C33600992001Education Department of GuangxiGuangxi Provincial 100 TalentGuangxi University under the Guangxi University Startup FundLouisiana State UniversityNational Science Foundation MCB-1616827
6 · The paper itself

Abstract

Low temperatures largely determine the geographic limits of plant species by reducing survival and growth. Inter-specific differences in the geographic distribution of mangrove species have been associated with cold tolerance, with exclusively tropical species being highly cold-sensitive and subtropical species being relatively cold-tolerant. To identify species-specific adaptations to low temperatures, we compared the chilling stress response of two widespread Indo-West Pacific mangrove species from Rhizophoraceae with differing latitudinal range limits-Bruguiera gymnorhiza (L.) Lam. ex Savigny (subtropical range limit) and Rhizophora apiculata Blume (tropical range limit). For both species, we measured the maximum photochemical efficiency of photosystem II (Fv/Fm) as a proxy for the physiological condition of the plants and examined gene expression profiles during chilling at 15 and 5 °C. At 15 °C, B. gymnorhiza maintained a significantly higher Fv/Fm than R. apiculata. However, at 5 °C, both species displayed equivalent Fv/Fm values. Thus, species-specific differences in chilling tolerance were only found at 15 °C, and both species were sensitive to chilling at 5 °C. At 15 °C, B. gymnorhiza downregulated genes related to the light reactions of photosynthesis and upregulated a gene involved in cyclic electron flow regulation, whereas R. apiculata downregulated more RuBisCo-related genes. At 5 °C, both species repressed genes related to CO2 assimilation. The downregulation of genes related to light absorption and upregulation of genes related to cyclic electron flow regulation are photoprotective mechanisms that likely contributed to the greater photosystem II photochemical efficiency of B. gymnorhiza at 15 °C. The results of this study provide evidence that the distributional range limits and potentially the expansion rates of plant species are associated with differences in the regulation of photosynthesis and photoprotective mechanisms under low temperatures.

Indexed as

RhizophoraceaeCold TemperatureGene Expression ProfilingPhotosynthesisPhotosystem II Protein ComplexPhotosystem II Protein Complexchilling stresscold tolerancecomparative transcriptomicslatitudinal range limitsphotochemical efficiencyRNAseq

Identifiers

PMID38366388
PMCPMC11443552
OpenAlexW4391898395

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.