Evidence map›Paper›PMID 38366289›Full record

ArticleArchives of virology2024

A novel alternavirus with three dsRNA segments from Fusarium pseudograminearum, the pathogen of Fusarium crown rot in wheat.

Fuyu Liu, Lele Xia, Shulin Cao, Haiyan Sun, Huaigu Chen, Qingchao Deng, Wei Li

Abstract read
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In one paragraph

Article in Archives of virology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Fuyu LiuCollege of Agriculture, Yangtze University, 434025, Hubei, Jingzhou, China.
Lele XiaCollege of Plant Protection, Nanjing Agricultural University, 210095, Jiangsu, Nanjing, China.
Shulin CaoInstitute of Plant Protection, Jiangsu Academy of Agricultural Sciences, 210014, Nanjing, Jiangsu, China.
Haiyan SunInstitute of Plant Protection, Jiangsu Academy of Agricultural Sciences, 210014, Nanjing, Jiangsu, China.
Huaigu ChenInstitute of Plant Protection, Jiangsu Academy of Agricultural Sciences, 210014, Nanjing, Jiangsu, China.
Qingchao DengCollege of Agriculture, Yangtze University, 434025, Hubei, Jingzhou, China. Dengqingchao@yangtzeu.edu.cn.
Wei LiInstitute of Plant Protection, Jiangsu Academy of Agricultural Sciences, 210014, Nanjing, Jiangsu, China. lw0501@jaas.ac.cn.ORCID http://orcid.org/0000-0001-9057-5809
Jiangsu Academy of Agricultural Sciences · CNNanjing Agricultural University · CNYangtze University · CN

Funding

National Natural Science Foundation of China 32072375
6 · The paper itself

Abstract

Three dsRNA segments were detected in Fusarium pseudograminearum strain CF14029, a pathogen causing Fusarium crown rot in China. Characterization and sequence analysis confirmed that these dsRNA sequences originated from the same virus. The viral genome consists of three dsRNA segments: dsRNA1 (3,560 nt in length), encoding an RNA-dependent RNA polymerase (RdRp), dsRNA2 (2,544 nt in length), encoding a hypothetical protein, and dsRNA3 (2,478 nt in length), encoding a putative coat protein (CP). Phylogenetic analysis based on the RdRp and CP amino acid sequences revealed a high degree of similarity of this virus to members of the genus Alternavirus, family Alternaviridae, isolated from other Fusarium fungi. As a novel member of the genus Alternavirus, this virus was provisionally named "Fusarium pseudograminearum alternavirus 1" (FpgAV1). Like other alternaviruses found in Fusarium species, the positive-sense strand of each genomic dsRNA of FpgAV1 possesses a poly(A) tail and a distinctive 5'-terminal octamer sequence (5'-GCT GTG TG-3'). This is the first report of the genomic sequence of an alternavirus identified in F. pseudograminearum.

Indexed as

FusariumGenome, ViralPhylogenyPlant DiseasesRNA-Dependent RNA PolymeraseRNA, Double-StrandedTriticumRNA-Dependent RNA PolymeraseRNA, Double-Stranded

Identifiers

PMID38366289
OpenAlexW4391878469

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.