Evidence map›Paper›PMID 38366077›Full record

ArticleThe ISME journal2024

Declines in ice cover are accompanied by light limitation responses and community change in freshwater diatoms.

Brittany N Zepernick, Emily E Chase, Elizabeth R Denison, Naomi E Gilbert, Alexander R Truchon, Thijs Frenken, William R Cody, Robbie M Martin, Justin D Chaffin, George S Bullerjahn and 2 more

Erratum issuedAbstract read
In one paragraph

Article in The ISME journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

Brittany N ZepernickDepartment of Microbiology, The University of Tennessee, Knoxville, TN 37996, United States.
Emily E ChaseDepartment of Microbiology, The University of Tennessee, Knoxville, TN 37996, United States.
Elizabeth R DenisonDepartment of Microbiology, The University of Tennessee, Knoxville, TN 37996, United States.
Naomi E GilbertDepartment of Microbiology, The University of Tennessee, Knoxville, TN 37996, United States.
Alexander R TruchonDepartment of Microbiology, The University of Tennessee, Knoxville, TN 37996, United States.
Thijs FrenkenHAS University of Applied Sciences, 5223 DE 's-Hertogenbosch, The Netherlands.
William R CodyAquatic Taxonomy Specialists, Malinta, OH 43535, United States.
Robbie M MartinDepartment of Microbiology, The University of Tennessee, Knoxville, TN 37996, United States.
Justin D ChaffinStone Laboratory and Ohio Sea Grant, The Ohio State University, Put-In-Bay, OH 43456, United States.
George S BullerjahnDepartment of Biological Sciences, Bowling Green State University, Bowling Green, OH 43403, United States.
R Michael L McKayGreat Lakes Institute for Environmental Research, University of Windsor, Windsor, Ontario, N9C 1A2, Canada.
Steven W WilhelmDepartment of Microbiology, The University of Tennessee, Knoxville, TN 37996, United States.

Funding

Woods Hole Center for Oceans and Human HealthP01ES028938 · NIEHS · WOODS HOLE OCEANOGRAPHIC INSTITUTION · PI Mindy Richlen · 2018 to 2026
$5.7M
The synergistic effects of climate and anthropogenic drivers on toxic cyanobacterial bloomsP01ES028939 · NIEHS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Gregory James Dick, David Joseph Kennedy · 2018 to 2026
$3.7M
NIEHS NIH HHS 1P01ES023-28 939-01NIEHS NIH HHS P01 ES028938NIEHS NIH HHS P01 ES028939NIH HHS
6 · The paper itself

Abstract

The rediscovery of diatom blooms embedded within and beneath the Lake Erie ice cover (2007-2012) ignited interest in psychrophilic adaptations and winter limnology. Subsequent studies determined the vital role ice plays in winter diatom ecophysiology as diatoms partition to the underside of ice, thereby fixing their location within the photic zone. Yet, climate change has led to widespread ice decline across the Great Lakes, with Lake Erie presenting a nearly "ice-free" state in several recent winters. It has been hypothesized that the resultant turbid, isothermal water column induces light limitation amongst winter diatoms and thus serves as a competitive disadvantage. To investigate this hypothesis, we conducted a physiochemical and metatranscriptomic survey that spanned spatial, temporal, and climatic gradients of the winter Lake Erie water column (2019-2020). Our results suggest that ice-free conditions decreased planktonic diatom bloom magnitude and altered diatom community composition. Diatoms increased their expression of various photosynthetic genes and iron transporters, which suggests that the diatoms are attempting to increase their quantity of photosystems and light-harvesting components (a well-defined indicator of light limitation). We identified two gene families which serve to increase diatom fitness in the turbid ice-free water column: proton-pumping rhodopsins (a potential second means of light-driven energy acquisition) and fasciclins (a means to "raft" together to increase buoyancy and co-locate to the surface to optimize light acquisition). With large-scale climatic changes already underway, our observations provide insight into how diatoms respond to the dynamic ice conditions of today and shed light on how they will fare in a climatically altered tomorrow.

Indexed as

DiatomsEcosystemIce CoverLakesWaterWaterclimate changefasciclinsGreat Lakesproton-pumping rhodopsinswinter limnology

Identifiers

PMID38366077
PMCPMC10939406

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.