Evidence map›Paper›PMID 38365956›Full record

ArticleMolecular systems biology2024

Dissecting the spatiotemporal diversity of adult neural stem cells.

Nina Mitic, Anika Neuschulz, Bastiaan Spanjaard, Julia Schneider, Nora Fresmann, Klara Tereza Novoselc, Taraneh Strunk, Lisa Münster, Pedro Olivares-Chauvet, Jovica Ninkovic and 1 more

Abstract read
In one paragraph

Article in Molecular systems biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Barcoding Notch signaling in the developing brain.Development (Cambridge, England) · 2024
    Article
  7. Article
  8. Barcoding Notch signaling in the developing brain.bioRxiv : the preprint server for biology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Nina Mitic *Max Delbrück Center for Molecular Medicine in the Helmholtz Association, Berlin Institute for Medical Systems Biology, Berlin, Germany.
Anika Neuschulz *Max Delbrück Center for Molecular Medicine in the Helmholtz Association, Berlin Institute for Medical Systems Biology, Berlin, Germany.ORCID http://orcid.org/0000-0001-6163-3344
Bastiaan SpanjaardMax Delbrück Center for Molecular Medicine in the Helmholtz Association, Berlin Institute for Medical Systems Biology, Berlin, Germany.
Julia SchneiderHelmholtz Center Munich - German Research Center for Environmental Health, Institute of Stem Cell Research, Munich, Germany.
Nora FresmannMax Delbrück Center for Molecular Medicine in the Helmholtz Association, Berlin Institute for Medical Systems Biology, Berlin, Germany.ORCID http://orcid.org/0000-0002-9233-5101
Klara Tereza NovoselcHelmholtz Center Munich - German Research Center for Environmental Health, Institute of Stem Cell Research, Munich, Germany.
Taraneh StrunkMax Delbrück Center for Molecular Medicine in the Helmholtz Association, Berlin Institute for Medical Systems Biology, Berlin, Germany.ORCID http://orcid.org/0009-0001-9420-7429
Lisa MünsterMax Delbrück Center for Molecular Medicine in the Helmholtz Association, Berlin Institute for Medical Systems Biology, Berlin, Germany.
Pedro Olivares-ChauvetMax Delbrück Center for Molecular Medicine in the Helmholtz Association, Berlin Institute for Medical Systems Biology, Berlin, Germany.
Jovica NinkovicHelmholtz Center Munich - German Research Center for Environmental Health, Institute of Stem Cell Research, Munich, Germany.ORCID http://orcid.org/0000-0002-4381-0041
Jan Philipp JunkerMax Delbrück Center for Molecular Medicine in the Helmholtz Association, Berlin Institute for Medical Systems Biology, Berlin, Germany. janphilipp.junker@mdc-berlin.de.ORCID http://orcid.org/0000-0002-2826-8290

Funding

EC | ERC | HORIZON EUROPE European Research Council (ERC) 101043364EC | ERC | HORIZON EUROPE European Research Council (ERC) 715361Helmholtz Artificial Intelligence Cooperation Unit (HAICU) ZT-I-PF-5-54
6 · The paper itself

Abstract

Adult stem cells are important for tissue turnover and regeneration. However, in most adult systems it remains elusive how stem cells assume different functional states and support spatially patterned tissue architecture. Here, we dissected the diversity of neural stem cells in the adult zebrafish brain, an organ that is characterized by pronounced zonation and high regenerative capacity. We combined single-cell transcriptomics of dissected brain regions with massively parallel lineage tracing and in vivo RNA metabolic labeling to analyze the regulation of neural stem cells in space and time. We detected a large diversity of neural stem cells, with some subtypes being restricted to a single brain region, while others were found globally across the brain. Global stem cell states are linked to neurogenic differentiation, with different states being involved in proliferative and non-proliferative differentiation. Our work reveals principles of adult stem cell organization and establishes a resource for the functional manipulation of neural stem cell subtypes.

Indexed as

Adult Stem CellsNeural Stem CellsAnimalsBrainCell DifferentiationNeurogenesisZebrafishMassively Parallel Lineage TracingRadial gliaSingle-cell RNA Metabolic LabelingSingle-cell TranscriptomicsZebrafish

Identifiers

PMID38365956
PMCPMC10987636

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.