Evidence map›Paper›PMID 38365885›Full record

ArticleCommunications biology2024

Dietary macronutrient composition impacts gene regulation in adipose tissue.

Kathryn M Farris, Alistair M Senior, Débora R Sobreira, Robert M Mitchell, Zachary T Weber, Lars R Ingerslev, Romain Barrès, Stephen J Simpson, Angela J Crean, Marcelo A Nobrega

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
7.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Article
  3. Nutrition Literacy, Hydration Awareness and Food Label Use in School Populations: A Cross-Sectional Study of Students and Teachers Across European Contexts.Journal of human nutrition and dietetics : the official journal of the British Dietetic Association · 2026
    Article
  4. Review
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 4 countries.

Kathryn M FarrisDepartment of Human Genetics, University of Chicago, Chicago, IL, 60637, USA. kmfarris@uchicago.edu.ORCID 0000-0002-7599-8050
Alistair M SeniorCharles Perkins Centre, The University of Sydney, Sydney, NSW, 2006, Australia.ORCID 0000-0001-9805-7280
Débora R SobreiraDepartment of Human Genetics, University of Chicago, Chicago, IL, 60637, USA.ORCID 0000-0002-2232-3922
Robert M MitchellDepartment of Human Genetics, University of Chicago, Chicago, IL, 60637, USA.
Zachary T WeberDepartment of Human Genetics, University of Chicago, Chicago, IL, 60637, USA.
Lars R IngerslevNovo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, DK-2200, Copenhagen, Denmark.
Romain BarrèsNovo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, DK-2200, Copenhagen, Denmark. barres@sund.ku.dk.ORCID 0000-0002-0158-519X
Stephen J SimpsonCharles Perkins Centre, The University of Sydney, Sydney, NSW, 2006, Australia. stephen.simpson@sydney.edu.au.ORCID 0000-0003-0256-7687
Angela J CreanCharles Perkins Centre, The University of Sydney, Sydney, NSW, 2006, Australia. angela.crean@sydney.edu.au.ORCID 0000-0003-2605-6435
Marcelo A NobregaDepartment of Human Genetics, University of Chicago, Chicago, IL, 60637, USA. nobrega@uchicago.edu.ORCID 0000-0002-2134-9661
University of Chicago · USThe University of Sydney · AUUniversity of Copenhagen · DK

Funding

Pilot and Feasibility ProgramP30DK020595 · NIDDK · UNIVERSITY OF CHICAGO · PI RONALD N COHEN · 2013 to 2026
$20.9M
PREDOCTORAL TRAINING IN GENETICS AND REGULATIONT32GM007197 · NIGMS · UNIVERSITY OF CHICAGO · PI ROTHMAN-DENES, LUCIA B. B · 1985 to 2020
$17.0M
Project-003U19AI162310 · NIAID · UNIVERSITY OF CHICAGO · PI Marcelo A. Nobrega, Carole Ober · 2021 to 2026
$10.6M
Cardiomyopathy Genomes ProjectR01HL128075 · NHLBI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI MCNALLY, ELIZABETH M, NOBREGA, MARCELO A. · 2015 to 2023
$5.3M
NHLBI NIH HHS R01 HL128075NIAID NIH HHS U19 AI162310NIDDK NIH HHS P30 DK020595NIGMS NIH HHS T32 GM007197Novo Nordisk Fonden (Novo Nordisk Foundation) NNF18CC0034900Novo Nordisk Fonden (Novo Nordisk Foundation) NNF18OC0033754U.S. Department of Health & Human Services | National Institutes of Health (NIH) T32GM007197
6 · The paper itself

Abstract

Diet is a key lifestyle component that influences metabolic health through several factors, including total energy intake and macronutrient composition. While the impact of caloric intake on gene expression and physiological phenomena in various tissues is well described, the influence of dietary macronutrient composition on these parameters is less well studied. Here, we use the Nutritional Geometry framework to investigate the role of macronutrient composition on metabolic function and gene regulation in adipose tissue. Using ten isocaloric diets that vary systematically in their proportion of energy from fat, protein, and carbohydrates, we find that gene expression and splicing are highly responsive to macronutrient composition, with distinct sets of genes regulated by different macronutrient interactions. Specifically, the expression of many genes associated with Bardet-Biedl syndrome is responsive to dietary fat content. Splicing and expression changes occur in largely separate gene sets, highlighting distinct mechanisms by which dietary composition influences the transcriptome and emphasizing the importance of considering splicing changes to more fully capture the gene regulation response to environmental changes such as diet. Our study provides insight into the gene regulation plasticity of adipose tissue in response to macronutrient composition, beyond the already well-characterized response to caloric intake.

Indexed as

Adipose TissueDietDietary FatsEnergy IntakeNutrientsDietary FatsNutrients

Identifiers

PMID38365885
PMCPMC10873408
OpenAlexW4391909561

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.