Evidence map›Paper›PMID 38363842›Full record

ArticleScience advances2024

Integration of population-level data sources into an individual-level clinical prediction model for dengue virus test positivity.

Robert J Williams, Ben J Brintz, Gabriel Ribeiro Dos Santos, Angkana T Huang, Darunee Buddhari, Surachai Kaewhiran, Sopon Iamsirithaworn, Alan L Rothman, Stephen Thomas, Aaron Farmer and 5 more

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact, top 97% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 0 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 7 institutions in 3 countries.

Robert J WilliamsDivision of Infectious Diseases, Department of Internal Medicine, University of Utah, Salt Lake City, UT, USA.ORCID 0000-0003-3099-1143
Ben J BrintzDivision of Infectious Diseases, Department of Internal Medicine, University of Utah, Salt Lake City, UT, USA.ORCID 0000-0003-4695-0290
Gabriel Ribeiro Dos SantosDepartment of Genetics, University of Cambridge, Cambridge, UK.ORCID 0000-0003-4668-8755
Angkana T HuangDepartment of Genetics, University of Cambridge, Cambridge, UK.ORCID 0000-0002-9857-3506
Darunee BuddhariDepartment of Virology, Armed Forces Research Institute of Medical Sciences, Bangkok, Thailand.
Surachai KaewhiranMinistry of Public Health, Nonthaburi, Thailand.
Sopon IamsirithawornMinistry of Public Health, Nonthaburi, Thailand.ORCID 0000-0002-6109-5002
Alan L RothmanInstitute for Immunology and Informatics and Department of Cell and Molecular Biology, University of Rhode Island, Providence, RI, USA.ORCID 0000-0002-4064-6848
Stephen ThomasDepartment of Microbiology and Immunology, SUNY Upstate Medical University, Syracuse, NY, USA.ORCID 0000-0002-8368-7682
Aaron FarmerDepartment of Virology, Armed Forces Research Institute of Medical Sciences, Bangkok, Thailand.ORCID 0000-0002-2115-4493
Stefan FernandezDepartment of Virology, Armed Forces Research Institute of Medical Sciences, Bangkok, Thailand.ORCID 0000-0001-8471-6265
Derek A T CummingsDepartment of Biology, University of Florida, Gainesville, FL, USA.ORCID 0000-0002-9437-1907
Kathryn B AndersonDepartment of Virology, Armed Forces Research Institute of Medical Sciences, Bangkok, Thailand.ORCID 0000-0002-5725-2351
Henrik SaljeDepartment of Genetics, University of Cambridge, Cambridge, UK.ORCID 0000-0003-3626-4254
Daniel T LeungDivision of Infectious Diseases, Department of Internal Medicine, University of Utah, Salt Lake City, UT, USA.ORCID 0000-0001-8401-0801
Armed Forces Research Institute of Medical Science · THUniversity of Cambridge · GBUniversity of Utah · USMinistry of Public Health · THSUNY Upstate Medical University · USUniversity of Florida · USUniversity of Rhode Island · US

Funding

VIRAL DETERMINANTS OF SEVERE DENGUE DISEASEP01AI034533 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI ROTHMAN, ALAN L · 1994 to 2022
$42.0M
CTSA UM1 Program at University of UtahUM1TR004409 · NCATS · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI RACHEL HESS, Jennifer Juhl Majersik · 2023 to 2026
$21.9M
Development of clinical decision tools for management of diarrhea of children in high and low resource settingsR01AI135114 · NIAID · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI LEUNG, DANIEL TED · 2018 to 2025
$4.0M
Defining correlates of protection from dengue illness in a long-term cohort study of multigenerational house-holds in ThailandR01AI175941 · NIAID · UPSTATE MEDICAL UNIVERSITY · PI Kathryn B Anderson · 2023 to 2026
$2.7M
Utah Stimulating Access to Research in Residency Transition Scholar (StARRTS)R38HL143605 · NHLBI · UNIVERSITY OF UTAH · PI CONROY, MARGARET B, OKUYEMI, KOLAWOLE S · 2018 to 2021
$1.3M
Utah Stimulating Access to Research in ResidencyR38HL167282 · NHLBI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Margaret B Conroy, JOSEPH BARNEY STANFORD · 2023 to 2026
$924k
Mentoring patient-oriented researchers in pediatric diarrheaK24AI166087 · NIAID · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Daniel Ted Leung · 2023 to 2026
$688k
European Research CouncilNCATS NIH HHS UM1 TR004409NHLBI NIH HHS R38 HL143605NHLBI NIH HHS R38 HL167282NIAID NIH HHS K24 AI166087NIAID NIH HHS P01 AI034533NIAID NIH HHS R01 AI135114NIAID NIH HHS R01 AI175941
6 · The paper itself

Abstract

The differentiation of dengue virus (DENV) infection, a major cause of acute febrile illness in tropical regions, from other etiologies, may help prioritize laboratory testing and limit the inappropriate use of antibiotics. While traditional clinical prediction models focus on individual patient-level parameters, we hypothesize that for infectious diseases, population-level data sources may improve predictive ability. To create a clinical prediction model that integrates patient-extrinsic data for identifying DENV among febrile patients presenting to a hospital in Thailand, we fit random forest classifiers combining clinical data with climate and population-level epidemiologic data. In cross-validation, compared to a parsimonious model with the top clinical predictors, a model with the addition of climate data, reconstructed susceptibility estimates, force of infection estimates, and a recent case clustering metric significantly improved model performance.

Indexed as

DengueDengue VirusClimateFeverHumansModels, StatisticalPrognosis

Identifiers

PMID38363842
PMCPMC10871531
OpenAlexW4391878165

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.