Evidence map›Paper›PMID 38363421›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2024

Genome-wide association mapping for seedling and adult resistance to powdery mildew in barley.

Jie Guo, Chenchen Zhao, Sanjiv Gupta, Greg Platz, Lisle Snyman, Meixue Zhou

Open access · hybridAbstract read
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
5.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Jie Guo *College of Agronomy, Shanxi Agricultural University, Jinzhong, 030801, China.
Chenchen Zhao *Tasmanian Institute of Agriculture, University of Tasmania, Launceston, TAS, 7250, Australia.
Sanjiv GuptaWestern Crop Genetics Alliance, College of Science, Health, Engineering and Education, Murdoch University, Murdoch, 6150, Australia.
Greg PlatzDepartment of Agriculture and Fisheries, Hermitage Research Facility, Warwick, QLD, 4370, Australia.
Lisle SnymanDepartment of Agriculture and Fisheries, Hermitage Research Facility, Warwick, QLD, 4370, Australia.
Meixue ZhouCollege of Agronomy, Shanxi Agricultural University, Jinzhong, 030801, China. Meixue.zhou@utas.edu.au.ORCID http://orcid.org/0000-0003-3009-7854
Shanxi Agricultural University · CNMurdoch University · AUUniversity of Tasmania · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageTwo new major QTL were identified for powdery mildew resistance. We confirmed that the QTL on 7HS contributed mainly to the adult-plant resistance, while another one on chromosome arm 1HS made a significant contribution to the seedling resistance. Powdery mildew (PM), caused by Blumeria hordei, can occur at all post emergent stages of barley and constantly threatens crop production. To identify more genes for effective resistance to powdery mildew for use in breeding programs, 696 barley accessions collected from different regions of the world were evaluated for PM resistance at seedling and adult growth stages in three different states of Australia. These barley accessions were genotyped using DArTSeq with over 18,000 markers for a genome-wide association study (GWAS). Using the FarmCPU model, 54 markers showed significant associations with PM resistance scored at the seedling and adult-plant stages in different states of Australia. Another 40 markers showed tentative associations (LOD > 4.0) with resistance. These markers are distributed across all seven barley chromosomes. Most of them were grouped into eleven QTL regions, coinciding with the locations of most of the reported resistance genes. Two major MTAs were identified on chromosome arms 3HS and 5HL, with one on 3HS contributing to adult plant resistance and the one on 5HL to both seedling and adult plant resistance. An MTA on 7HS contributed mainly to the adult-plant resistance, while another one on chromosome arm 1HS made a significant contribution to the seedling resistance.

Indexed as

AscomycotaHordeumDisease ResistanceGenetic MarkersGenome-Wide Association StudyPlant BreedingPlant DiseasesSeedlingsGenetic Markers

Identifiers

PMID38363421
PMCPMC10873221
OpenAlexW4391879792

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.