Evidence map›Paper›PMID 38361743›Full record

ArticleFrontiers in molecular neuroscience2024

Transcriptome profile analysis in spinal cord injury rats with transplantation of menstrual blood-derived stem cells.

Longju Qi, Wenwei Jiang, Wenhua He, Xiangzhe Li, Jiahuan Wu, Shiyuan Chen, Zehua Liao, Shumin Yu, Jinyi Liu, Yuyu Sun and 3 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in molecular neuroscience, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Longju Qi *Laboratory Animal Center, School of Medicine, Nantong University, Nantong, Jiangsu, China.
Wenwei Jiang *Laboratory Animal Center, School of Medicine, Nantong University, Nantong, Jiangsu, China.
Wenhua He *Department of Basic Medicine, Luohe Medical College, Luohe, Henan, China.
Xiangzhe LiAffiliated Nantong Hospital 3 of Nantong University, Nantong, Jiangsu, China.
Jiahuan WuRehabilitation Medicine Center, Suzhou Hospital, Affiliated Hospital of Medical School, Nanjing University, Suzhou, Jiangsu, China.
Shiyuan ChenLaboratory Animal Center, School of Medicine, Nantong University, Nantong, Jiangsu, China.
Zehua LiaoLaboratory Animal Center, School of Medicine, Nantong University, Nantong, Jiangsu, China.
Shumin YuLaboratory Animal Center, School of Medicine, Nantong University, Nantong, Jiangsu, China.
Jinyi LiuLaboratory Animal Center, School of Medicine, Nantong University, Nantong, Jiangsu, China.
Yuyu SunAffiliated Nantong Hospital 3 of Nantong University, Nantong, Jiangsu, China.
Qinfeng WuRehabilitation Medicine Center, Suzhou Hospital, Affiliated Hospital of Medical School, Nanjing University, Suzhou, Jiangsu, China.
Chuanming DongLaboratory Animal Center, School of Medicine, Nantong University, Nantong, Jiangsu, China.
Qinghua WangLaboratory Animal Center, School of Medicine, Nantong University, Nantong, Jiangsu, China.
Nantong University · CNAffiliated Hospital of Nantong University · CNNanjing University · CNLuohe Medical College · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Menstrual blood-derived stem cells (MenSCs) are vital in treating many degenerative and traumatic disorders. However, the underlying molecular mechanisms remain obscure in MenSCs-treating spinal cord injury (SCI) rats. Methods: MenSCs were adopted into the injured sites of rat spinal cords at day 7 post surgery and the tissues were harvested for total RNA sequencing analysis at day 21 after surgery to investigate the expression patterns of RNAs. The differentially expressed genes (DEGs) were analyzed with volcano and heatmap plot. DEGs were sequentially analyzed by weighted gene co-expression network, functional enrichment, and competitive endogenous RNAs (ceRNA) network analysis. Next, expression of selected miRNAs, lncRNAs, circRNAs and mRNAs were validated by quantitative real-time polymerase chain reaction (qRT-PCR). Bioinformatics packages and extra databases were enrolled to scoop the genes functions and their interaction relationships. Results: A total of 89 lncRNAs, 65 circRNAs, 120 miRNAs and 422 mRNAs were significantly upregulated and 65 lncRNAs, 72 circRNAs, 74 miRNAs, and 190 mRNAs were significantly downregulated in the MenSCs treated rats compared to SCI ones. Current investigation revealed that MenSCs treatment improve the recovery of the injured rats and the most significantly involved pathways in SCI regeneration were cell adhesion molecules, nature killer cell mediated cytotoxicity, primary immunodeficiency, chemokine signaling pathway, T cell receptor signaling pathway and B cell receptor signaling pathway. Moreover, the lncRNA-miRNA-mRNA and circRNA-miRNA-mRNA ceRNA network of SCI was constructed. Finally, the protein-protein interaction (PPI) network was constructed using the top 100 DE mRNAs. The constructed PPI network included 47 nodes and 70 edges. Discussion: In summary, the above results revealed the expression profile and potential functions of differentially expressed (DE) RNAs in the injured spinal cords of rats in the MenSCs-treated and SCI groups, and this study may provide new clues to understand the mechanisms of MenSCs in treating SCI.

Indexed as

axonal regenerationcompeting endogenous RNAmenstrual blood-derived stem cellsnon-coding RNAspinal cord injury

Identifiers

PMID38361743
PMCPMC10867146
OpenAlexW4391474071

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.