Evidence map›Paper›PMID 38361007›Full record

ArticleJournal of imaging informatics in medicine2024

Improving the Automated Diagnosis of Breast Cancer with Mesh Reconstruction of Ultrasound Images Incorporating 3D Mesh Features and a Graph Attention Network.

Sadia Sultana Chowa, Sami Azam, Sidratul Montaha, Md Rahad Islam Bhuiyan, Mirjam Jonkman

Abstract read
In one paragraph

Article in Journal of imaging informatics in medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sadia Sultana ChowaFaculty of Science and Technology, Charles Darwin University, Casuarina, NT, 0909, Australia.
Sami AzamFaculty of Science and Technology, Charles Darwin University, Casuarina, NT, 0909, Australia. sami.azam@cdu.edu.au.ORCID 0000-0001-7572-9750
Sidratul MontahaFaculty of Science and Technology, Charles Darwin University, Casuarina, NT, 0909, Australia.
Md Rahad Islam BhuiyanFaculty of Science and Technology, Charles Darwin University, Casuarina, NT, 0909, Australia.
Mirjam JonkmanFaculty of Science and Technology, Charles Darwin University, Casuarina, NT, 0909, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study proposes a novel approach for breast tumor classification from ultrasound images into benign and malignant by converting the region of interest (ROI) of a 2D ultrasound image into a 3D representation using the point-e system, allowing for in-depth analysis of underlying characteristics. Instead of relying solely on 2D imaging features, this method extracts 3D mesh features that describe tumor patterns more precisely. Ten informative and medically relevant mesh features are extracted and assessed with two feature selection techniques. Additionally, a feature pattern analysis has been conducted to determine the feature's significance. A feature table with dimensions of 445 × 12 is generated and a graph is constructed, considering the rows as nodes and the relationships among the nodes as edges. The Spearman correlation coefficient method is employed to identify edges between the strongly connected nodes (with a correlation score greater than or equal to 0.7), resulting in a graph containing 56,054 edges and 445 nodes. A graph attention network (GAT) is proposed for the classification task and the model is optimized with an ablation study, resulting in the highest accuracy of 99.34%. The performance of the proposed model is compared with ten machine learning (ML) models and one-dimensional convolutional neural network where the test accuracy of these models ranges from 73 to 91%. Our novel 3D mesh-based approach, coupled with the GAT, yields promising performance for breast tumor classification, outperforming traditional models, and has the potential to reduce time and effort of radiologists providing a reliable diagnostic system.

Indexed as

Breast NeoplasmsImaging, Three-DimensionalAlgorithmsFemaleHumansImage Interpretation, Computer-AssistedNeural Networks, ComputerUltrasonography, MammaryBreast tumorFeature extractionGraph attention network (GAT)MeshPoint cloudUltrasound

Identifiers

PMID38361007
PMCPMC11573965

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.