Evidence map›Paper›PMID 38360755›Full record

ArticleNature communications2024

Identification of structural and regulatory cell-shape determinants in Haloferax volcanii.

Heather Schiller, Yirui Hong, Joshua Kouassi, Theopi Rados, Jasmin Kwak, Anthony DiLucido, Daniel Safer, Anita Marchfelder, Friedhelm Pfeiffer, Alexandre Bisson and 2 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
4.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. The halophilic archaeonMicrobiology spectrum · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Journal of bacteriology · 2025
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Provirus deletion frommicroLife · 2025
    Article
  18. Halofilins as emerging bactofilin families of archaeal cell shape plasticity orchestrators.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  19. MinD2 modulates cell shape and motility in the archaeonbioRxiv : the preprint server for biology · 2024
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Heather SchillerUniversity of Pennsylvania, Department of Biology, Philadelphia, PA, 19104, USA.ORCID 0000-0002-7622-4735
Yirui HongUniversity of Pennsylvania, Department of Biology, Philadelphia, PA, 19104, USA.ORCID 0009-0006-4976-6068
Joshua KouassiUniversity of Pennsylvania, Department of Biology, Philadelphia, PA, 19104, USA.
Theopi RadosBrandeis University, Department of Biology, Waltham, MA, 02453, USA.ORCID 0000-0001-8663-2487
Jasmin KwakBrandeis University, Department of Biology, Waltham, MA, 02453, USA.
Anthony DiLucidoUniversity of Pennsylvania, Department of Biology, Philadelphia, PA, 19104, USA.ORCID 0000-0001-7965-4469
Daniel SaferUniversity of Pennsylvania, Department of Physiology, Philadelphia, PA, 19104, USA.ORCID 0000-0002-0542-1424
Anita MarchfelderBiology II, Ulm University, 89069, Ulm, Germany.ORCID 0000-0002-1382-1794
Friedhelm PfeifferBiology II, Ulm University, 89069, Ulm, Germany.ORCID 0000-0003-4691-3246
Alexandre BissonBrandeis University, Department of Biology, Waltham, MA, 02453, USA. bisson@brandeis.edu.ORCID 0000-0002-5940-7230
Stefan SchulzeUniversity of Pennsylvania, Department of Biology, Philadelphia, PA, 19104, USA. sxssbi1@rit.edu.ORCID 0000-0002-4771-7987
Mechthild PohlschroderUniversity of Pennsylvania, Department of Biology, Philadelphia, PA, 19104, USA. pohlschr@sas.upenn.edu.ORCID 0000-0001-7729-1342
University of Pennsylvania · USBrandeis University · USUniversität Ulm · DERochester Institute of Technology · US

Funding

Training in Microbial Pathogenesis and GenomicsT32AI141393 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI GOULIAN, MARK D, ZHU, JUN · 2019 to 2023
$1.3M
Thermo Scientific Orbitrap Eclipse Tribrid ETD Mass Spectrometer for UConn ProteomicsS10OD028445 · OD · UNIVERSITY OF CONNECTICUT STORRS · PI BALSBAUGH, JEREMY · 2021 to 2021
$994k
NIAID NIH HHS T32 AI141393NIH HHS S10 OD028445
6 · The paper itself

Abstract

Archaea play indispensable roles in global biogeochemical cycles, yet many crucial cellular processes, including cell-shape determination, are poorly understood. Haloferax volcanii, a model haloarchaeon, forms rods and disks, depending on growth conditions. Here, we used a combination of iterative proteomics, genetics, and live-cell imaging to identify mutants that only form rods or disks. We compared the proteomes of the mutants with wild-type cells across growth phases, thereby distinguishing between protein abundance changes specific to cell shape and those related to growth phases. The results identified a diverse set of proteins, including predicted transporters, transducers, signaling components, and transcriptional regulators, as important for cell-shape determination. Through phenotypic characterization of deletion strains, we established that rod-determining factor A (RdfA) and disk-determining factor A (DdfA) are required for the formation of rods and disks, respectively. We also identified structural proteins, including an actin homolog that plays a role in disk-shape morphogenesis, which we named volactin. Using live-cell imaging, we determined volactin's cellular localization and showed its dynamic polymerization and depolymerization. Our results provide insights into archaeal cell-shape determination, with possible implications for understanding the evolution of cell morphology regulation across domains.

Indexed as

Archaeal ProteinsHaloferax volcaniiCell ShapeArchaeal Proteins

Identifiers

PMID38360755
PMCPMC10869688
OpenAlexW4391839422

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.