Evidence map›Paper›PMID 38359266›Full record

ArticleJournal of applied oral science : revista FOB2024

Exploring the role of the WNT5A rs566926 polymorphism and its interactions in non-syndromic orofacial cleft: a multicenter study in Brazil.

Lorraynne Dos Santos Lara, Ricardo D Coletta, Renato Assis Machado, Lilianny Querino Rocha de Oliveira, Hercílio Martelli Júnior, Silvia Regina de Almeida Reis, Rafaela Scariot, Luiz Evaristo Ricci Volpato

Open access · diamondAbstract readMulticenter Study
In one paragraph

Article in Journal of applied oral science : revista FOB, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Observational
  2. [Gene-gene/gene-environment interaction of transforming growth factor-β signaling pathway and the risk of non-syndromic oral clefts].Beijing da xue xue bao. Yi xue ban = Journal of Peking University. Health sciences · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Lorraynne Dos Santos LaraUniversidade de Cuiabá, Programa de Pós-Graduação em Ciências Odontológicas Integradas, Faculdade de Odontologia de Cuiabá, Cuiabá, MT, Brasil.ORCID http://orcid.org/0000-0002-5082-4185
Ricardo D ColettaUniversidade Estadual de Campinas, Departamento de Diagnóstico Oral e Programa de Pós-Graduação em Biologia Buco-Dental, Faculdade de Odontologia de Piracicaba, Piracicaba, SP, Brasil.ORCID http://orcid.org/0000-0001-5285-3046
Renato Assis MachadoUniversidade Estadual de Campinas, Faculdade de Odontologia de Piracicaba, Programa de Pós-Graduação em Biologia Buco-Dental, Piracicaba, SP, Brasil.ORCID http://orcid.org/0000-0002-1697-3662
Lilianny Querino Rocha de OliveiraUniversidade Estadual de Campinas, Faculdade de Odontologia de Piracicaba, Programa de Pós-Graduação em Biologia Buco-Dental, Piracicaba, SP, Brasil.ORCID http://orcid.org/0000-0003-4842-5756
Hercílio Martelli JúniorUniversidade Estadual de Montes Claros, Departamento de Odontologia, Clínica de Estomatologia, Montes Claros, MG, Brasil, e.ORCID http://orcid.org/0000-0001-9691-2802
Silvia Regina de Almeida ReisEscola Bahiana de Medicina e Saúde Pública, Departamento de Ciências Básicas, Salvador, Bahia, Brasil.ORCID http://orcid.org/0000-0003-1195-0485
Rafaela ScariotUniversidade Federal do Paraná, setor de Ciências da Saúde, Departamento de Estomatologia, Disciplina de Cirurgia Bucomaxilofacial, Curitiba, PR, Brasil.ORCID http://orcid.org/0000-0002-4911-6413
Luiz Evaristo Ricci VolpatoUniversidade de Cuiabá, Programa de Pós-Graduação em Ciências Odontológicas Integradas, Faculdade de Odontologia de Cuiabá, Cuiabá, MT, Brasil.ORCID http://orcid.org/0000-0002-2969-1963
Universidade Estadual de Campinas (UNICAMP) · BRHospital Universitário Cajuru · BRUniversidade de Cuiabá · BREscola Bahiana de Medicina e Saúde Pública · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAssociations between the WNT5A rs566926 variant and non-syndromic orofacial cleft (NSOC) have been reported in different populations.

objectiveThis study aimed to investigate the role of the rs566926 single nucleotide polymorphism (SNP) in WNT5A and its interactions with SNPs in BMP4, FGFR1, GREM1, MMP2, and WNT3 in the occurrence of NSOC in a Brazilian population. METHODOLOGY: A case-control genetic association study was carried out involving participants from four regions of Brazil, totaling 801 patients with non-syndromic cleft lip with or without cleft palate (NSCL±P), 273 patients with cleft palate only (NSCPO), and 881 health volunteers without any congenital condition (control). Applying TaqMan allelic discrimination assays, we evaluated WNT5A rs566926 in an ancestry-structured multiple logistic regression analysis, considering sex and genomic ancestry as covariates. Interactions between rs566926 and variants in genes involved in the WNT5A signaling pathway (BMP4, FGFR1, GREM1, MMP2, and WNT3) were also explored.

resultsWNT5A rs566926 was significantly associated with an increased risk of NSCL±P, particularly due to a strong association with non-syndromic cleft lip only (NSCLO), in which the C allele increased the risk by 32% (OR: 1.32, 95% CI: 1.04-1.67, p=0.01). According to the proportions of European and African genomic ancestry, the association of rs566926 reached significant levels only in patients with European ancestry. Multiple interactions were detected between WNT5A rs566926 and BMP4 rs2071047, GREM1 rs16969681 and rs16969862, and FGFR1 rs7829058.

conclusionThe WNT5A rs566926 polymorphism was associated with NSCL±P, particularly in individuals with NSCLO and high European ancestry. Epistatic interactions involving WNT5A rs566926 and variants in BMP4, GREM1, and FGFR1 may contribute to the risk of NSCL±P in the Brazilian population.

Indexed as

Cleft LipCleft PalateBrazilCase-Control StudiesGenetic Predisposition to DiseaseGenotypeHumansMatrix Metalloproteinase 2Polymorphism, Single NucleotideWnt-5a ProteinMatrix Metalloproteinase 2Wnt-5a ProteinWNT5A protein, human

Identifiers

PMID38359266
PMCPMC11018296
OpenAlexW4391758386

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.