Evidence map›Paper›PMID 38359047›Full record

ArticlePloS one2024

Characterization of covalent inhibitors that disrupt the interaction between the tandem SH2 domains of SYK and FCER1G phospho-ITAM.

Frances M Bashore, Vittorio L Katis, Yuhong Du, Arunima Sikdar, Dongxue Wang, William J Bradshaw, Karolina A Rygiel, Tina M Leisner, Rod Chalk, Swati Mishra and 12 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Experimental and therapeutic medicine · 2026
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

22 authors at 6 institutions in 2 countries.

Frances M BashoreStructural Genomics Consortium, Division of Chemical Biology and Medicinal Chemistry, UNC Eshelman School of Pharmacy, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America.ORCID https://orcid.org/0000-0003-4241-9873
Vittorio L KatisNuffield Department of Medicine, Centre for Medicines Discovery, ARUK Oxford Drug Discovery Institute, University of Oxford, Headington, Oxford, United Kingdom.ORCID https://orcid.org/0000-0002-0696-8042
Yuhong DuDepartment of Pharmacology and Chemical Biology, School of Medicine, Emory University, Atlanta, GA, United States of America.
Arunima SikdarDivision of Chemical Biology and Medicinal Chemistry, Center for Integrative Chemical Biology and Drug Discovery, UNC Eshelman School of Pharmacy, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America.ORCID https://orcid.org/0000-0002-0132-8513
Dongxue WangDepartment of Pharmacology and Chemical Biology, School of Medicine, Emory University, Atlanta, GA, United States of America.
William J BradshawNuffield Department of Medicine, Centre for Medicines Discovery, ARUK Oxford Drug Discovery Institute, University of Oxford, Headington, Oxford, United Kingdom.ORCID https://orcid.org/0000-0002-7985-9752
Karolina A RygielNuffield Department of Medicine, Centre for Medicines Discovery, ARUK Oxford Drug Discovery Institute, University of Oxford, Headington, Oxford, United Kingdom.
Tina M LeisnerDivision of Chemical Biology and Medicinal Chemistry, Center for Integrative Chemical Biology and Drug Discovery, UNC Eshelman School of Pharmacy, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America.
Rod ChalkNuffield Department of Medicine, Centre for Medicines Discovery, ARUK Oxford Drug Discovery Institute, University of Oxford, Headington, Oxford, United Kingdom.
Swati MishraDepartment of Laboratory Medicine and Pathology, School of Medicine, University of Washington, Seattle, WA, United States of America.
C Andrew WilliamsDepartment of Laboratory Medicine and Pathology, School of Medicine, University of Washington, Seattle, WA, United States of America.ORCID https://orcid.org/0000-0001-5401-1475
Opher GileadiNuffield Department of Medicine, Centre for Medicines Discovery, ARUK Oxford Drug Discovery Institute, University of Oxford, Headington, Oxford, United Kingdom.
Paul E BrennanNuffield Department of Medicine, Centre for Medicines Discovery, ARUK Oxford Drug Discovery Institute, University of Oxford, Headington, Oxford, United Kingdom.
Jesse C WileySage Bionetworks, Seattle, WA, United States of America.
Jake GockleySage Bionetworks, Seattle, WA, United States of America.
Gregory A CaryThe Jackson Laboratory for Mammalian Genetics, Bar Harbor, ME, United States of America.
Gregory W CarterThe Jackson Laboratory for Mammalian Genetics, Bar Harbor, ME, United States of America.ORCID https://orcid.org/0000-0002-2834-8186
Jessica E YoungDepartment of Laboratory Medicine and Pathology, School of Medicine, University of Washington, Seattle, WA, United States of America.
Kenneth H PearceDivision of Chemical Biology and Medicinal Chemistry, Center for Integrative Chemical Biology and Drug Discovery, UNC Eshelman School of Pharmacy, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America.
Haian FuDepartment of Pharmacology and Chemical Biology, School of Medicine, Emory University, Atlanta, GA, United States of America.
Emory-Sage-SGC TREAT-AD Center
Alison D AxtmanStructural Genomics Consortium, Division of Chemical Biology and Medicinal Chemistry, UNC Eshelman School of Pharmacy, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America.ORCID https://orcid.org/0000-0003-4779-9932
University of Oxford · GBUniversity of North Carolina at Chapel Hill · USEmory University · USUniversity of Washington · USJackson Laboratory · USSage Bionetworks · US

Funding

TREAT AD Structural Biology CoreU54AG065187 · NIA · EMORY UNIVERSITY · PI ALLAN I LEVEY · 2019 to 2026
$69.7M
Mechanisms of Brain Dysmorphology in MN1 C-Terminal Truncation Syndrome, a Novel Intellectual Developmental Disability Disorder P50HD103524 · NICHD · UNIVERSITY OF WASHINGTON · PI Sandra E Juul · 2020 to 2026
$9.9M
ADA3: a novel target for HPV16 E6 oncoproteinR01CA094143 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI BAND, VIMLA · 2002 to 2006
$1.7M
NCI NIH HHS R01 CA094143NIA NIH HHS U54 AG065187
6 · The paper itself

Abstract

RNA sequencing and genetic data support spleen tyrosine kinase (SYK) and high affinity immunoglobulin epsilon receptor subunit gamma (FCER1G) as putative targets to be modulated for Alzheimer's disease (AD) therapy. FCER1G is a component of Fc receptor complexes that contain an immunoreceptor tyrosine-based activation motif (ITAM). SYK interacts with the Fc receptor by binding to doubly phosphorylated ITAM (p-ITAM) via its two tandem SH2 domains (SYK-tSH2). Interaction of the FCER1G p-ITAM with SYK-tSH2 enables SYK activation via phosphorylation. Since SYK activation is reported to exacerbate AD pathology, we hypothesized that disruption of this interaction would be beneficial for AD patients. Herein, we developed biochemical and biophysical assays to enable the discovery of small molecules that perturb the interaction between the FCER1G p-ITAM and SYK-tSH2. We identified two distinct chemotypes using a high-throughput screen (HTS) and orthogonally assessed their binding. Both chemotypes covalently modify SYK-tSH2 and inhibit its interaction with FCER1G p-ITAM, however, these compounds lack selectivity and this limits their utility as chemical tools.

Indexed as

Protein-Tyrosine Kinasessrc Homology DomainsEnzyme PrecursorsHumansImmunoreceptor Tyrosine-Based Activation MotifIntracellular Signaling Peptides and ProteinsPhosphorylationReceptors, FcSyk KinaseEnzyme PrecursorsIntracellular Signaling Peptides and ProteinsProtein-Tyrosine KinasesReceptors, FcSyk KinaseSYK protein, human

Identifiers

PMID38359047
PMCPMC10868801
OpenAlexW4391839340

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.