Evidence map›Paper›PMID 38358452›Full record

ArticleActa parasitologica2024

Development of a "Rapid-Crypto Colorimetric LAMP Test" to Detect Cryptosporidiosis in Feces of Newborns Calves.

Muhammet Karakavuk, Hüseyin Can, Şengül Can, Tuğba Karakavuk, Mert Döşkaya, Aysu Değirmenci Döşkaya

Open access · hybridAbstract read
In one paragraph

Article in Acta parasitologica, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.0field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Muhammet KarakavukEge University, Ödemiş Vocational School, Ödemiş, İzmir, Türkiye.
Hüseyin CanEge University, Vaccine Development Application and Research Center, Bornova, İzmir, Türkiye.
Şengül CanUcyıldız Biotechnology and Veterinary Services, Yunusemre, Manisa, Türkiye.
Tuğba KarakavukEge University, Vaccine Development Application and Research Center, Bornova, İzmir, Türkiye.
Mert DöşkayaUcyıldız Biotechnology and Veterinary Services, Yunusemre, Manisa, Türkiye.
Aysu Değirmenci DöşkayaEge University, Vaccine Development Application and Research Center, Bornova, İzmir, Türkiye. aysu.degirmenci.doskaya@ege.edu.tr.ORCID http://orcid.org/0000-0003-0363-9099
Ege University · TRManisa Celal Bayar University · TR

Funding

T.C. Küçük ve Orta Ölçekli İşletmeleri Geliştirme ve Destekleme İdaresi Başkanlığı 2020-682-3
6 · The paper itself

Abstract

backgroundCryptosporidiosis is a disease that causes major intestinal damage in humans and animals. The causative agents of the disease are Cryptosporidium species. In newborn calves, diarrhea can lead to death, resulting in significant economic losses for the farms. Therefore, accurate, rapid, and cost-effective diagnosis of the disease is very important. MATERIAL AND

methodsIn this study, a novel colorimetric loop-mediated isothermal amplification (LAMP) test named "Rapid-Crypto Colorimetric LAMP test" targeting Cryptosporidium spp. 18S rRNA gene was developed to detect cryptosporidiosis in the feces of newborn calves. The analytical sensitivity of the test was determined by plasmid controls. Clinical sensitivity was determined using the feces of 127 calves collected from farms in İzmir and Manisa provinces. All of the samples were also investigated with Real-Time PCR targeting the Cryptosporidium spp. COWP gene. Cross-reactivity was tested using the DNA of other parasites and bacteria.

resultsAccording to the results, the analytical sensitivity of the "Rapid-Crypto Colorimetric LAMP test" was found as 1 copy plasmid/reaction. When the results were compared with the Real-Time PCR test, the sensitivity of the "Rapid-Crypto Colorimetric LAMP test" was 100% and the specificity was 97.4%. The test did not cross-react with other parasites and bacteria.  

conclusionThe "Rapid-Crypto Colorimetric LAMP test" developed in this study provides an advantage in the diagnosis of Cryptosporidium spp. in calf stool samples since it can be applied in basic laboratories or in the field, does not require experienced personnel, and has high sensitivity. Moreover, diagnosis can be made with the naked eye without using any device.

Indexed as

Animals, NewbornCattle DiseasesColorimetryCryptosporidiosisCryptosporidiumFecesNucleic Acid Amplification TechniquesSensitivity and SpecificityAnimalsCattleDNA, ProtozoanMolecular Diagnostic TechniquesRNA, Ribosomal, 18SDNA, ProtozoanRNA, Ribosomal, 18S18S rRNACalfCryptosporidium spp.LAMPLoop-mediated isothermal amplificationRT-PCR

Identifiers

PMID38358452
PMCPMC11001726
OpenAlexW4391842259

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.